Functional clusters

Information

  • Type InterPro
  • Description Ankyrin repeat-containing domain superfamily

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_228 5 CH_aag_80 7 28 0.0000000230869
Acer truncatum chr4 5 CH_acertr_103 10 29 0.0000000000126766
Acer truncatum chr10 5 CH_acertr_145 10 41 0.00000000066937
Acer truncatum chr10 5 CH_acertr_681 4 5 0.000137588
Amaranthus hybridus AmaHy_arrow1_Scaffold_12 5 CH_amhyb_148 5 6 0.0000020253
Amaranthus hybridus AmaHy_arrow1_Scaffold_9 5 CH_amhyb_285 4 5 0.000252223
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.07 5 CH_arhy_175 10 17 0.00000000000000239676
Amborella trichopoda AmTr_v1.0_scaffold00149 5 CH_atr_112 6 7 0.000000000233727
Brassica carinata ChrC07 5 CH_bca_1088 4 4 0.0000137064
Brassica carinata ChrC02 5 CH_bca_2091 4 8 0.000948852
Brassica napus C03 5 CH_bna_1025 4 5 0.0000695957
Brassica napus C04 5 CH_bna_1167 5 16 0.000198066
Brassica napus C08 5 CH_bna_1343 4 7 0.000484553
Beta vulgaris Chr8_EL10_PGA_scaffold4 5 CH_bvu_447 4 5 0.000319574
Camellia sinensis var. sinensis Chr11 5 CH_camsi_1298 5 15 0.000438658
Corylus avellana 5 5 CH_cav_266 8 20 0.000000429653
Corylus avellana 4 5 CH_cav_845 5 10 0.000819362
Coffea canephora chr6 5 CH_ccan_320 3 4 0.0000156117
Citrus clementina scaffold_9 5 CH_ccl_335 7 15 0.000000370592
Citrus clementina scaffold_5 5 CH_ccl_449 5 7 0.0000192359
Citrus clementina scaffold_1 5 CH_ccl_475 6 15 0.0000354484
Citrus clementina scaffold_9 5 CH_ccl_59 13 17 3.52762e-20
Carpinus fangiana Cfa01 5 CH_cfa_19 15 15 1.05088e-27
Carpinus fangiana Cfa06 5 CH_cfa_227 7 13 0.000000109871
Carpinus fangiana Cfa05 5 CH_cfa_25 14 14 1.3465e-25
Cardamine hirsuta Chr8 5 CH_chi_164 6 7 0.000000000904895
Carya illinoinensis Chr14 5 CH_cil_101 11 19 0.0000000000000034379
Carya illinoinensis Chr09 5 CH_cil_253 6 6 0.00000000346932
Carya illinoinensis Chr08 5 CH_cil_444 5 6 0.00000303522
Carya illinoinensis Chr07 5 CH_cil_547 7 31 0.0000536778
Carya illinoinensis Chr15 5 CH_cil_730 4 5 0.000369337
Carica papaya supercontig_30 5 CH_cpa_272 4 7 0.0000920914
Chenopodium quinoa C_Quinoa_Scaffold_1710 5 CH_cqu_717 4 4 0.000135129
Chenopodium quinoa C_Quinoa_Scaffold_1373 5 CH_cqu_718 4 4 0.000135129
Chenopodium quinoa C_Quinoa_Scaffold_3458 5 CH_cqu_719 4 4 0.000135129
Capsella rubella scaffold_6 5 CH_cru_96 7 7 0.000000000000854987
Daucus carota DCARv2_Chr2 5 CH_dca_18 12 21 2.85513e-18
Daucus carota DCARv2_Chr1 5 CH_dca_581 4 6 0.000353219
Davidia involucrata GWHABJS00000017 5 CH_din_12 15 15 1.01441e-27
Davidia involucrata GWHABJS00000004 5 CH_din_602 5 9 0.000156049
Davidia involucrata GWHABJS00000016 5 CH_din_836 4 5 0.000799485
Durio zibethinus NW_019168492.1 5 CH_dzi_27 14 25 3.36177e-21
Eucalyptus grandis Chr05 5 CH_egr_143 19 49 1.06288e-21
Eucalyptus grandis Chr06 5 CH_egr_492 7 7 0.00000000022062
Eucalyptus grandis Chr04 5 CH_egr_67 25 58 4.64083e-31
Erythranthe guttata scaffold_12 5 CH_egut_680 4 7 0.000455398
Fragaria vesca Fvb1 5 CH_fve_178 6 6 0.000000000185623
Fragaria vesca Fvb6 5 CH_fve_573 5 14 0.0000873349
Gossypium hirsutum D10 5 CH_ghi_11 28 34 7.12457e-53
Gossypium hirsutum D08 5 CH_ghi_446 6 8 0.0000000717974
Glycine max Gm13 5 CH_gma_842 6 31 0.000414444
Gossypium raimondii Chr11 5 CH_gra_2 30 34 5.23873e-57
Helianthus annuus HanXRQChr17 5 CH_han_770 4 4 0.0000279517
Hydrangea macrophylla Hma1.2p1_0172F.1 5 CH_hma_251 4 6 0.0000499546
Lonicera japonica GWHAAZE00000004 5 CH_lonja_140 14 31 9.98913e-17
Lonicera japonica GWHAAZE00000001 5 CH_lonja_175 10 13 0.000000000000023155
Lonicera japonica GWHAAZE00000003 5 CH_lonja_20 30 52 4.0562e-44
Lonicera japonica GWHAAZE00000004 5 CH_lonja_570 7 17 0.00000235231
Lonicera japonica GWHAAZE00000002 5 CH_lonja_592 8 29 0.00000411065
Lonicera japonica GWHAAZE00000145 5 CH_lonja_593 8 29 0.00000411065
Lonicera japonica GWHAAZE00000003 5 CH_lonja_67 15 17 4.85591e-25
Lactuca sativa Lsat_1_v8_lg_8 5 CH_lsa_567 5 9 0.0000242271
Lactuca sativa Lsat_1_v8_lg_7 5 CH_lsa_74 13 31 2.42203e-17
Magnolia biondii Chr04 5 CH_mbi_495 7 33 0.000000699958
Magnolia biondii Chr17 5 CH_mbi_692 4 5 0.0000255219
Medicago truncatula chr5 5 CH_mtr_177 11 33 0.00000000000000398557
Medicago truncatula chr1 5 CH_mtr_973 6 32 0.0000546835
Nelumbo nucifera chr5 5 CH_nnu_232 9 76 0.000000531086
Olea europaea chr8 5 CH_oeu_49 8 13 0.00000000000652937
Petunia axillaris Peaxi162Scf00226 5 CH_pax_114 6 7 0.000000000612997
Prunus persica Pp03 5 CH_ppe_148 9 13 0.000000000000294525
Prunus persica Pp06 5 CH_ppe_512 5 8 0.000015598
Papaver somniferum NC_039358.1 5 CH_pso_109 10 13 2.59553e-16
Papaver somniferum NW_020624376.1 5 CH_pso_589 6 12 0.0000013293
Populus trichocarpa Chr11 5 CH_ptr_32 14 15 1.30496e-26
Phaseolus vulgaris Chr06 5 CH_pvu_124 10 32 0.0000000000344662
Quercus lobata 12 5 CH_qlo_127 17 31 1.34248e-22
Quercus lobata 5 5 CH_qlo_15 30 41 2.13876e-48
Quercus lobata 4 5 CH_qlo_1536 7 29 0.000254933
Quercus lobata 1 5 CH_qlo_204 16 40 3.35604e-18
Quercus lobata 3 5 CH_qlo_504 11 31 0.0000000000884605
Quercus lobata 4 5 CH_qlo_854 8 21 0.000000319235
Quercus lobata CM012294 5 CH_qlo_91 19 36 3.20636e-25
Rosa chinensis RcHm_v2.0_Chr1 5 CH_rch_813 8 62 0.00000519015
Rosa chinensis RcHm_v2.0_Chr7 5 CH_rch_933 8 77 0.0000307657
Rhododendron simsii chr06 5 CH_rsi_239 9 17 0.0000000000662716
Rhododendron simsii chr08 5 CH_rsi_710 6 17 0.0000759878
Rhododendron simsii chr04 5 CH_rsi_916 4 5 0.000558434
Simmondsia chinensis GWHAASQ00000003 5 CH_sci_107 7 15 0.000000040722
Sechium edule LG01 5 CH_sed_96 8 19 0.000000000602431
Sequoiadendron giganteum chr6 5 CH_sgi_353 13 40 0.00000000000000868645
Sequoiadendron giganteum chr5 5 CH_sgi_41 26 60 5.06645e-37
Selenicereus undatus Scaffold_3410 5 CH_sun_234 4 6 0.000171591
Trochodendron aralioides group15 5 CH_tar_47 11 18 5.73201e-16
Trochodendron aralioides group17 5 CH_tar_481 4 4 0.0000541271
Trochodendron aralioides group10 5 CH_tar_482 4 4 0.0000541271
Theobroma cacao Chromosome_3 5 CH_tca_405 5 6 0.00000334716
Theobroma cacao Chromosome_10 5 CH_tca_446 5 7 0.0000116445
Theobroma cacao Chromosome_6 5 CH_tca_553 4 4 0.0000777897
Vigna mungo CM024074.1 5 CH_vmu_103 7 13 0.00000000191096
Vigna mungo CM024073.1 5 CH_vmu_266 4 4 0.0000131397
Vitis vinifera chr7 5 CH_vvi_132 8 9 0.00000000000279672
Vitis vinifera chr9 5 CH_vvi_171 7 8 0.000000000330081
Vitis vinifera chr11 5 CH_vvi_265 7 13 0.0000000684871
Vitis vinifera chr5 5 CH_vvi_40 16 30 3.56586e-22
Vitis vinifera chr12 5 CH_vvi_41 15 24 4.58824e-22
Vitis vinifera chr3 5 CH_vvi_543 4 4 0.0000943433
Vitis vinifera chr16 5 CH_vvi_544 4 4 0.0000943433
Anthoceros agrestis Sc2ySwM_228 6 CH_aag_80 7 28 0.0000000230869
Acer truncatum chr4 6 CH_acertr_103 10 29 0.0000000000126766
Acer truncatum chr10 6 CH_acertr_145 10 41 0.00000000066937
Acer truncatum chr10 6 CH_acertr_681 4 5 0.000137588
Amaranthus hybridus AmaHy_arrow1_Scaffold_12 6 CH_amhyb_148 5 6 0.0000020253
Amaranthus hybridus AmaHy_arrow1_Scaffold_9 6 CH_amhyb_285 4 5 0.000252223
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.07 6 CH_arhy_175 10 17 0.00000000000000239676
Amborella trichopoda AmTr_v1.0_scaffold00149 6 CH_atr_112 6 7 0.000000000233727
Brassica carinata ChrC07 6 CH_bca_1088 4 4 0.0000137064
Brassica carinata ChrC02 6 CH_bca_2091 4 8 0.000948852
Brassica napus C03 6 CH_bna_1025 4 5 0.0000695957
Brassica napus C04 6 CH_bna_1167 5 16 0.000198066
Brassica napus C08 6 CH_bna_1343 4 7 0.000484553
Beta vulgaris Chr8_EL10_PGA_scaffold4 6 CH_bvu_447 4 5 0.000319574
Camellia sinensis var. sinensis Chr11 6 CH_camsi_1298 5 15 0.000438658
Corylus avellana 5 6 CH_cav_266 8 20 0.000000429653
Corylus avellana 4 6 CH_cav_845 5 10 0.000819362
Coffea canephora chr6 6 CH_ccan_320 3 4 0.0000156117
Citrus clementina scaffold_9 6 CH_ccl_335 7 15 0.000000370592
Citrus clementina scaffold_5 6 CH_ccl_449 5 7 0.0000192359
Citrus clementina scaffold_1 6 CH_ccl_475 6 15 0.0000354484
Citrus clementina scaffold_9 6 CH_ccl_59 13 17 3.52762e-20
Carpinus fangiana Cfa01 6 CH_cfa_19 15 15 1.05088e-27
Carpinus fangiana Cfa06 6 CH_cfa_227 7 13 0.000000109871
Carpinus fangiana Cfa05 6 CH_cfa_25 14 14 1.3465e-25
Cardamine hirsuta Chr8 6 CH_chi_164 6 7 0.000000000904895
Carya illinoinensis Chr14 6 CH_cil_101 11 19 0.0000000000000034379
Carya illinoinensis Chr09 6 CH_cil_253 6 6 0.00000000346932
Carya illinoinensis Chr08 6 CH_cil_444 5 6 0.00000303522
Carya illinoinensis Chr07 6 CH_cil_547 7 31 0.0000536778
Carya illinoinensis Chr15 6 CH_cil_730 4 5 0.000369337
Carica papaya supercontig_30 6 CH_cpa_272 4 7 0.0000920914
Chenopodium quinoa C_Quinoa_Scaffold_1710 6 CH_cqu_717 4 4 0.000135129
Chenopodium quinoa C_Quinoa_Scaffold_1373 6 CH_cqu_718 4 4 0.000135129
Chenopodium quinoa C_Quinoa_Scaffold_3458 6 CH_cqu_719 4 4 0.000135129
Capsella rubella scaffold_6 6 CH_cru_96 7 7 0.000000000000854987
Daucus carota DCARv2_Chr2 6 CH_dca_18 12 21 2.85513e-18
Daucus carota DCARv2_Chr1 6 CH_dca_581 4 6 0.000353219
Davidia involucrata GWHABJS00000017 6 CH_din_12 15 15 1.01441e-27
Davidia involucrata GWHABJS00000004 6 CH_din_602 5 9 0.000156049
Davidia involucrata GWHABJS00000016 6 CH_din_836 4 5 0.000799485
Durio zibethinus NW_019168492.1 6 CH_dzi_27 14 25 3.36177e-21
Eucalyptus grandis Chr05 6 CH_egr_143 19 49 1.06288e-21
Eucalyptus grandis Chr06 6 CH_egr_492 7 7 0.00000000022062
Eucalyptus grandis Chr04 6 CH_egr_67 25 58 4.64083e-31
Erythranthe guttata scaffold_12 6 CH_egut_680 4 7 0.000455398
Fragaria vesca Fvb1 6 CH_fve_178 6 6 0.000000000185623
Fragaria vesca Fvb6 6 CH_fve_573 5 14 0.0000873349
Gossypium hirsutum D10 6 CH_ghi_11 28 34 7.12457e-53
Gossypium hirsutum D08 6 CH_ghi_446 6 8 0.0000000717974
Glycine max Gm13 6 CH_gma_842 6 31 0.000414444
Gossypium raimondii Chr11 6 CH_gra_2 30 34 5.23873e-57
Helianthus annuus HanXRQChr17 6 CH_han_770 4 4 0.0000279517
Hydrangea macrophylla Hma1.2p1_0172F.1 6 CH_hma_251 4 6 0.0000499546
Lonicera japonica GWHAAZE00000004 6 CH_lonja_140 14 31 9.98913e-17
Lonicera japonica GWHAAZE00000001 6 CH_lonja_175 10 13 0.000000000000023155
Lonicera japonica GWHAAZE00000003 6 CH_lonja_20 30 52 4.0562e-44
Lonicera japonica GWHAAZE00000004 6 CH_lonja_570 7 17 0.00000235231
Lonicera japonica GWHAAZE00000002 6 CH_lonja_592 8 29 0.00000411065
Lonicera japonica GWHAAZE00000145 6 CH_lonja_593 8 29 0.00000411065
Lonicera japonica GWHAAZE00000003 6 CH_lonja_67 15 17 4.85591e-25
Lactuca sativa Lsat_1_v8_lg_8 6 CH_lsa_567 5 9 0.0000242271
Lactuca sativa Lsat_1_v8_lg_7 6 CH_lsa_74 13 31 2.42203e-17
Magnolia biondii Chr04 6 CH_mbi_495 7 33 0.000000699958
Magnolia biondii Chr17 6 CH_mbi_692 4 5 0.0000255219
Medicago truncatula chr5 6 CH_mtr_177 11 33 0.00000000000000398557
Medicago truncatula chr1 6 CH_mtr_973 6 32 0.0000546835
Nelumbo nucifera chr5 6 CH_nnu_232 9 76 0.000000531086
Olea europaea chr8 6 CH_oeu_49 8 13 0.00000000000652937
Petunia axillaris Peaxi162Scf00226 6 CH_pax_114 6 7 0.000000000612997
Prunus persica Pp03 6 CH_ppe_148 9 13 0.000000000000294525
Prunus persica Pp06 6 CH_ppe_512 5 8 0.000015598
Papaver somniferum NC_039358.1 6 CH_pso_109 10 13 2.59553e-16
Papaver somniferum NW_020624376.1 6 CH_pso_589 6 12 0.0000013293
Populus trichocarpa Chr11 6 CH_ptr_32 14 15 1.30496e-26
Phaseolus vulgaris Chr06 6 CH_pvu_124 10 32 0.0000000000344662
Quercus lobata 12 6 CH_qlo_127 17 31 1.34248e-22
Quercus lobata 5 6 CH_qlo_15 30 41 2.13876e-48
Quercus lobata 4 6 CH_qlo_1536 7 29 0.000254933
Quercus lobata 1 6 CH_qlo_204 16 40 3.35604e-18
Quercus lobata 3 6 CH_qlo_504 11 31 0.0000000000884605
Quercus lobata 4 6 CH_qlo_854 8 21 0.000000319235
Quercus lobata CM012294 6 CH_qlo_91 19 36 3.20636e-25
Rosa chinensis RcHm_v2.0_Chr1 6 CH_rch_813 8 62 0.00000519015
Rosa chinensis RcHm_v2.0_Chr7 6 CH_rch_933 8 77 0.0000307657
Rhododendron simsii chr06 6 CH_rsi_239 9 17 0.0000000000662716
Rhododendron simsii chr08 6 CH_rsi_710 6 17 0.0000759878
Rhododendron simsii chr04 6 CH_rsi_916 4 5 0.000558434
Simmondsia chinensis GWHAASQ00000003 6 CH_sci_107 7 15 0.000000040722
Sechium edule LG01 6 CH_sed_96 8 19 0.000000000602431
Sequoiadendron giganteum chr6 6 CH_sgi_353 13 40 0.00000000000000868645
Sequoiadendron giganteum chr5 6 CH_sgi_41 26 60 5.06645e-37
Selenicereus undatus Scaffold_3410 6 CH_sun_234 4 6 0.000171591
Trochodendron aralioides group15 6 CH_tar_47 11 18 5.73201e-16
Trochodendron aralioides group17 6 CH_tar_481 4 4 0.0000541271
Trochodendron aralioides group10 6 CH_tar_482 4 4 0.0000541271
Theobroma cacao Chromosome_3 6 CH_tca_405 5 6 0.00000334716
Theobroma cacao Chromosome_10 6 CH_tca_446 5 7 0.0000116445
Theobroma cacao Chromosome_6 6 CH_tca_553 4 4 0.0000777897
Vigna mungo CM024074.1 6 CH_vmu_103 7 13 0.00000000191096
Vigna mungo CM024073.1 6 CH_vmu_266 4 4 0.0000131397
Vitis vinifera chr7 6 CH_vvi_132 8 9 0.00000000000279672
Vitis vinifera chr9 6 CH_vvi_171 7 8 0.000000000330081
Vitis vinifera chr11 6 CH_vvi_265 7 13 0.0000000684871
Vitis vinifera chr5 6 CH_vvi_40 16 30 3.56586e-22
Vitis vinifera chr12 6 CH_vvi_41 15 24 4.58824e-22
Vitis vinifera chr3 6 CH_vvi_543 4 4 0.0000943433
Vitis vinifera chr16 6 CH_vvi_544 4 4 0.0000943433

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001