Functional clusters

Information

  • Type InterPro
  • Description Helix-loop-helix DNA-binding domain superfamily

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.19 5 CH_arhy_1273 4 6 0.000744481
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.09 5 CH_arhy_890 4 4 0.0000500486
Camellia sinensis var. sinensis Chr1 5 CH_camsi_1146 6 33 0.000235579
Camellia sinensis var. sinensis Chr2 5 CH_camsi_908 5 12 0.000043838
Eucalyptus grandis Chr08 5 CH_egr_260 9 11 0.00000000000000106198
Erythranthe guttata scaffold_13 5 CH_egut_467 5 11 0.000047302
Helianthus annuus HanXRQChr11 5 CH_han_576 5 7 0.00000203804
Striga asiatica scaffold149 5 CH_sas_79 7 35 0.00000377013
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.19 6 CH_arhy_1273 4 6 0.000744481
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.09 6 CH_arhy_890 4 4 0.0000500486
Camellia sinensis var. sinensis Chr1 6 CH_camsi_1146 6 33 0.000235579
Camellia sinensis var. sinensis Chr2 6 CH_camsi_908 5 12 0.000043838
Eucalyptus grandis Chr08 6 CH_egr_260 9 11 0.00000000000000106198
Erythranthe guttata scaffold_13 6 CH_egut_467 5 11 0.000047302
Helianthus annuus HanXRQChr11 6 CH_han_576 5 7 0.00000203804
Striga asiatica scaffold149 6 CH_sas_79 7 35 0.00000377013

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001