Functional clusters

Information

  • Type InterPro
  • Description DNA ligase, ATP-dependent, N-terminal domain superfamily

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrC08 5 CH_bca_893 3 7 0.00000287806
Carica papaya supercontig_170 5 CH_cpa_590 2 2 0.000570396
Fragaria vesca Fvb3 5 CH_fve_277 3 3 0.0000000208231
Lonicera japonica GWHAAZE00000002 5 CH_lonja_1082 2 2 0.000359324
Quercus lobata CM012294 5 CH_qlo_1601 2 2 0.000309773
Sequoiadendron giganteum chr1 5 CH_sgi_2476 2 2 0.000487151
Trochodendron aralioides group10 5 CH_tar_905 2 2 0.000600366
Vanilla planifolia CM028161.1 5 CH_vpl_243 4 47 0.00000322475
Brassica carinata ChrC08 6 CH_bca_893 3 7 0.00000287806
Carica papaya supercontig_170 6 CH_cpa_590 2 2 0.000570396
Fragaria vesca Fvb3 6 CH_fve_277 3 3 0.0000000208231
Lonicera japonica GWHAAZE00000002 6 CH_lonja_1082 2 2 0.000359324
Quercus lobata CM012294 6 CH_qlo_1601 2 2 0.000309773
Sequoiadendron giganteum chr1 6 CH_sgi_2476 2 2 0.000487151
Trochodendron aralioides group10 6 CH_tar_905 2 2 0.000600366
Vanilla planifolia CM028161.1 6 CH_vpl_243 4 47 0.00000322475

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001