Functional clusters
Information
- Type InterPro
- Description Knottin, scorpion toxin-like superfamily
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.14 | 5 | CH_arhy_1075 | 3 | 14 | 0.000273573 |
| Brassica carinata | ChrB02 | 5 | CH_bca_138 | 8 | 42 | 0.000000000000826366 |
| Brassica carinata | ChrC02 | 5 | CH_bca_1478 | 3 | 4 | 0.000156617 |
| Brassica carinata | ChrC08 | 5 | CH_bca_1479 | 3 | 4 | 0.000156617 |
| Brassica napus | C04 | 5 | CH_bna_1412 | 3 | 5 | 0.000627063 |
| Brassica oleracea | C8 | 5 | CH_bol_835 | 3 | 9 | 0.00066622 |
| Capsicum annuum | PGAv.1.6.scaffold1084 | 5 | CH_can_291 | 4 | 6 | 0.0000000982402 |
| Ceratophyllum demersum | 2 | 5 | CH_cde_12 | 5 | 6 | 0.0000000000000105074 |
| Carpinus fangiana | Cfa01 | 5 | CH_cfa_561 | 2 | 2 | 0.000454408 |
| Carica papaya | supercontig_8 | 5 | CH_cpa_675 | 2 | 2 | 0.000950661 |
| Cucumis sativus L. | chr7 | 5 | CH_csa_460 | 2 | 2 | 0.000500856 |
| Daucus carota | DCARv2_Chr4 | 5 | CH_dca_355 | 3 | 5 | 0.000017441 |
| Erigeron canadensis | Conyza_canadensis_scaffold:3 | 5 | CH_eca_14 | 8 | 12 | 9.42551e-24 |
| Eucalyptus grandis | Chr02 | 5 | CH_egr_1283 | 2 | 2 | 0.000351165 |
| Erythranthe guttata | scaffold_5 | 5 | CH_egut_257 | 4 | 5 | 0.0000000423415 |
| Erythranthe guttata | scaffold_10 | 5 | CH_egut_471 | 3 | 4 | 0.0000489648 |
| Helianthus annuus | HanXRQChr16 | 5 | CH_han_20 | 13 | 45 | 2.51366e-28 |
| Lactuca sativa | Lsat_1_v8_lg_7 | 5 | CH_lsa_39 | 8 | 10 | 8.64821e-23 |
| Medicago truncatula | chr8 | 5 | CH_mtr_266 | 6 | 9 | 0.00000000000506823 |
| Medicago truncatula | chr8 | 5 | CH_mtr_3 | 23 | 35 | 1.01442e-57 |
| Medicago truncatula | chr3 | 5 | CH_mtr_527 | 4 | 4 | 0.0000000609324 |
| Nicotiana tabacum | Nitab4.5_0000023 | 5 | CH_nta_35 | 4 | 4 | 0.0000000000198202 |
| Olea europaea | chr11 | 5 | CH_oeu_122 | 3 | 3 | 0.0000000427407 |
| Oryza sativa ssp. japonica | chr02 | 5 | CH_osa_339 | 3 | 4 | 0.0000020079 |
| Petunia axillaris | Peaxi162Scf00635 | 5 | CH_pax_123 | 5 | 10 | 0.00000000372655 |
| Petunia axillaris | Peaxi162Scf00376 | 5 | CH_pax_357 | 3 | 3 | 0.0000217185 |
| Pisum sativum | chr4LG4 | 5 | CH_psa_203 | 6 | 53 | 0.0000000577081 |
| Pisum sativum | chr4LG4 | 5 | CH_psa_380 | 5 | 57 | 0.0000182873 |
| Phaseolus vulgaris | Chr02 | 5 | CH_pvu_159 | 4 | 4 | 0.00000000119119 |
| Salvia bowleyana | GWHASIU00000004 | 5 | CH_sbo_116 | 7 | 40 | 0.000000000000016666 |
| Simmondsia chinensis | GWHAASQ00000014 | 5 | CH_sci_466 | 2 | 2 | 0.000510856 |
| Solanum lycopersicum | SL4.0ch07 | 5 | CH_sly_123 | 6 | 7 | 0.00000000000021359 |
| Solanum lycopersicum | SL4.0ch07 | 5 | CH_sly_18 | 14 | 35 | 9.09511e-30 |
| Solanum lycopersicum | SL4.0ch11 | 5 | CH_sly_547 | 3 | 3 | 0.000036897 |
| Solanum pennellii | Spenn-ch07 | 5 | CH_spe_66 | 6 | 7 | 0.00000000000000369001 |
| Solanum pennellii | Spenn-ch07 | 5 | CH_spe_88 | 5 | 5 | 0.00000000000124787 |
| Solanum tuberosum | ST4.03ch07 | 5 | CH_stu_945 | 3 | 19 | 0.000837098 |
| Trifolium pratense | Tp57577_TGAC_v2_LG4 | 5 | CH_tpr_183 | 4 | 7 | 0.0000000325374 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.14 | 6 | CH_arhy_1075 | 3 | 14 | 0.000273573 |
| Brassica carinata | ChrB02 | 6 | CH_bca_138 | 8 | 42 | 0.000000000000826366 |
| Brassica carinata | ChrC02 | 6 | CH_bca_1478 | 3 | 4 | 0.000156617 |
| Brassica carinata | ChrC08 | 6 | CH_bca_1479 | 3 | 4 | 0.000156617 |
| Brassica napus | C04 | 6 | CH_bna_1412 | 3 | 5 | 0.000627063 |
| Brassica oleracea | C8 | 6 | CH_bol_835 | 3 | 9 | 0.00066622 |
| Capsicum annuum | PGAv.1.6.scaffold1084 | 6 | CH_can_291 | 4 | 6 | 0.0000000982402 |
| Ceratophyllum demersum | 2 | 6 | CH_cde_12 | 5 | 6 | 0.0000000000000105074 |
| Carpinus fangiana | Cfa01 | 6 | CH_cfa_561 | 2 | 2 | 0.000454408 |
| Carica papaya | supercontig_8 | 6 | CH_cpa_675 | 2 | 2 | 0.000950661 |
| Cucumis sativus L. | chr7 | 6 | CH_csa_460 | 2 | 2 | 0.000500856 |
| Daucus carota | DCARv2_Chr4 | 6 | CH_dca_355 | 3 | 5 | 0.000017441 |
| Erigeron canadensis | Conyza_canadensis_scaffold:3 | 6 | CH_eca_14 | 8 | 12 | 9.42551e-24 |
| Eucalyptus grandis | Chr02 | 6 | CH_egr_1283 | 2 | 2 | 0.000351165 |
| Erythranthe guttata | scaffold_5 | 6 | CH_egut_257 | 4 | 5 | 0.0000000423415 |
| Erythranthe guttata | scaffold_10 | 6 | CH_egut_471 | 3 | 4 | 0.0000489648 |
| Helianthus annuus | HanXRQChr16 | 6 | CH_han_20 | 13 | 45 | 2.51366e-28 |
| Lactuca sativa | Lsat_1_v8_lg_7 | 6 | CH_lsa_39 | 8 | 10 | 8.64821e-23 |
| Medicago truncatula | chr8 | 6 | CH_mtr_266 | 6 | 9 | 0.00000000000506823 |
| Medicago truncatula | chr8 | 6 | CH_mtr_3 | 23 | 35 | 1.01442e-57 |
| Medicago truncatula | chr3 | 6 | CH_mtr_527 | 4 | 4 | 0.0000000609324 |
| Nicotiana tabacum | Nitab4.5_0000023 | 6 | CH_nta_35 | 4 | 4 | 0.0000000000198202 |
| Olea europaea | chr11 | 6 | CH_oeu_122 | 3 | 3 | 0.0000000427407 |
| Oryza sativa ssp. japonica | chr02 | 6 | CH_osa_339 | 3 | 4 | 0.0000020079 |
| Petunia axillaris | Peaxi162Scf00635 | 6 | CH_pax_123 | 5 | 10 | 0.00000000372655 |
| Petunia axillaris | Peaxi162Scf00376 | 6 | CH_pax_357 | 3 | 3 | 0.0000217185 |
| Pisum sativum | chr4LG4 | 6 | CH_psa_203 | 6 | 53 | 0.0000000577081 |
| Pisum sativum | chr4LG4 | 6 | CH_psa_380 | 5 | 57 | 0.0000182873 |
| Phaseolus vulgaris | Chr02 | 6 | CH_pvu_159 | 4 | 4 | 0.00000000119119 |
| Salvia bowleyana | GWHASIU00000004 | 6 | CH_sbo_116 | 7 | 40 | 0.000000000000016666 |
| Simmondsia chinensis | GWHAASQ00000014 | 6 | CH_sci_466 | 2 | 2 | 0.000510856 |
| Solanum lycopersicum | SL4.0ch07 | 6 | CH_sly_123 | 6 | 7 | 0.00000000000021359 |
| Solanum lycopersicum | SL4.0ch07 | 6 | CH_sly_18 | 14 | 35 | 9.09511e-30 |
| Solanum lycopersicum | SL4.0ch11 | 6 | CH_sly_547 | 3 | 3 | 0.000036897 |
| Solanum pennellii | Spenn-ch07 | 6 | CH_spe_66 | 6 | 7 | 0.00000000000000369001 |
| Solanum pennellii | Spenn-ch07 | 6 | CH_spe_88 | 5 | 5 | 0.00000000000124787 |
| Solanum tuberosum | ST4.03ch07 | 6 | CH_stu_945 | 3 | 19 | 0.000837098 |
| Trifolium pratense | Tp57577_TGAC_v2_LG4 | 6 | CH_tpr_183 | 4 | 7 | 0.0000000325374 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |