Functional clusters

Information

  • Type InterPro
  • Description Ribonuclease T2-like superfamily

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group11 5 CH_ach_189 3 3 0.0000030099
Actinidia chinensis Lachesis_group16 5 CH_ach_221 3 4 0.0000120358
Magnolia biondii Chr01 5 CH_mbi_176 5 7 0.0000000000178204
Magnolia biondii Chr07 5 CH_mbi_440 4 9 0.000000258712
Medicago truncatula chr2 5 CH_mtr_525 5 17 0.0000000572631
Nelumbo nucifera chr4 5 CH_nnu_110 6 36 0.000000000610676
Oryza sativa ssp. japonica chr07 5 CH_osa_301 3 4 0.000000585672
Rosa chinensis RcHm_v2.0_Chr4 5 CH_rch_519 4 6 0.0000000425933
Selaginella moellendorffii scaffold_6 5 CH_smo_280 2 2 0.000280112
Actinidia chinensis Lachesis_group11 6 CH_ach_189 3 3 0.0000030099
Actinidia chinensis Lachesis_group16 6 CH_ach_221 3 4 0.0000120358
Magnolia biondii Chr01 6 CH_mbi_176 5 7 0.0000000000178204
Magnolia biondii Chr07 6 CH_mbi_440 4 9 0.000000258712
Medicago truncatula chr2 6 CH_mtr_525 5 17 0.0000000572631
Nelumbo nucifera chr4 6 CH_nnu_110 6 36 0.000000000610676
Oryza sativa ssp. japonica chr07 6 CH_osa_301 3 4 0.000000585672
Rosa chinensis RcHm_v2.0_Chr4 6 CH_rch_519 4 6 0.0000000425933
Selaginella moellendorffii scaffold_6 6 CH_smo_280 2 2 0.000280112

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001