Functional clusters
Information
- Type InterPro
- Description PLAT/LH2 domain superfamily
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aquilegia oxysepala | CHR02 | 5 | CH_aox_377 | 3 | 5 | 0.0001484 |
| Coffea canephora | chr2 | 5 | CH_ccan_143 | 4 | 34 | 0.0000000195476 |
| Marchantia polymorpha | scaffold_36 | 5 | CH_mpo_167 | 3 | 4 | 0.000147998 |
| Marchantia polymorpha | scaffold_134 | 5 | CH_mpo_83 | 4 | 6 | 0.00000064305 |
| Papaver somniferum | NC_039362.1 | 5 | CH_pso_1004 | 3 | 6 | 0.000174631 |
| Papaver somniferum | NW_020624377.1 | 5 | CH_pso_206 | 6 | 16 | 0.00000000000546705 |
| Papaver somniferum | NC_039361.1 | 5 | CH_pso_913 | 3 | 5 | 0.0000873454 |
| Salvia bowleyana | GWHASIU00000006 | 5 | CH_sbo_128 | 5 | 6 | 0.0000000000000890887 |
| Simmondsia chinensis | GWHAASQ00000016 | 5 | CH_sci_20 | 8 | 8 | 7.52131e-21 |
| Sequoiadendron giganteum | chr10 | 5 | CH_sgi_1906 | 3 | 3 | 0.0000697727 |
| Aquilegia oxysepala | CHR02 | 6 | CH_aox_377 | 3 | 5 | 0.0001484 |
| Coffea canephora | chr2 | 6 | CH_ccan_143 | 4 | 34 | 0.0000000195476 |
| Marchantia polymorpha | scaffold_36 | 6 | CH_mpo_167 | 3 | 4 | 0.000147998 |
| Marchantia polymorpha | scaffold_134 | 6 | CH_mpo_83 | 4 | 6 | 0.00000064305 |
| Papaver somniferum | NC_039362.1 | 6 | CH_pso_1004 | 3 | 6 | 0.000174631 |
| Papaver somniferum | NW_020624377.1 | 6 | CH_pso_206 | 6 | 16 | 0.00000000000546705 |
| Papaver somniferum | NC_039361.1 | 6 | CH_pso_913 | 3 | 5 | 0.0000873454 |
| Salvia bowleyana | GWHASIU00000006 | 6 | CH_sbo_128 | 5 | 6 | 0.0000000000000890887 |
| Simmondsia chinensis | GWHAASQ00000016 | 6 | CH_sci_20 | 8 | 8 | 7.52131e-21 |
| Sequoiadendron giganteum | chr10 | 6 | CH_sgi_1906 | 3 | 3 | 0.0000697727 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |