Functional clusters

Information

  • Type InterPro
  • Description Winged helix DNA-binding domain superfamily

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.15 5 CH_arhy_718 7 19 0.00000574056
Arabidopsis thaliana Chr5 5 CH_ath_156 9 55 0.00000000341102
Carya illinoinensis Chr05 5 CH_cil_383 5 5 0.000000581008
Eucalyptus grandis Chr08 5 CH_egr_898 8 24 0.00000411847
Lactuca sativa Lsat_1_v8_lg_8 5 CH_lsa_270 7 11 0.00000000808581
Rhododendron simsii chr05 5 CH_rsi_562 4 4 0.00000974158
Sequoiadendron giganteum chr2 5 CH_sgi_2203 7 32 0.000256845
Trifolium pratense Tp57577_TGAC_v2_LG5 5 CH_tpr_249 7 20 0.000000678324
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.15 6 CH_arhy_718 7 19 0.00000574056
Arabidopsis thaliana Chr5 6 CH_ath_156 9 55 0.00000000341102
Carya illinoinensis Chr05 6 CH_cil_383 5 5 0.000000581008
Eucalyptus grandis Chr08 6 CH_egr_898 8 24 0.00000411847
Lactuca sativa Lsat_1_v8_lg_8 6 CH_lsa_270 7 11 0.00000000808581
Rhododendron simsii chr05 6 CH_rsi_562 4 4 0.00000974158
Sequoiadendron giganteum chr2 6 CH_sgi_2203 7 32 0.000256845
Trifolium pratense Tp57577_TGAC_v2_LG5 6 CH_tpr_249 7 20 0.000000678324

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001