Functional clusters
Information
- Type InterPro
- Description Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aquilegia oxysepala | CHR02 | 5 | CH_aox_85 | 6 | 8 | 0.000000000534381 |
| Amborella trichopoda | AmTr_v1.0_scaffold00174 | 5 | CH_atr_271 | 4 | 4 | 0.00000137918 |
| Eucalyptus grandis | Chr02 | 5 | CH_egr_804 | 4 | 4 | 0.000000771714 |
| Fragaria vesca | Fvb2 | 5 | CH_fve_677 | 3 | 3 | 0.000260892 |
| Glycine max | Gm03 | 5 | CH_gma_493 | 5 | 11 | 0.00000995371 |
| Lupinus albus | Lalb_Chr24 | 5 | CH_lal_467 | 4 | 7 | 0.00013677 |
| Lupinus albus | Lalb_Chr07 | 5 | CH_lal_61 | 7 | 7 | 0.000000000000116929 |
| Marchantia polymorpha | scaffold_88 | 5 | CH_mpo_129 | 4 | 13 | 0.0000428085 |
| Nelumbo nucifera | chr6 | 5 | CH_nnu_416 | 4 | 9 | 0.0001023 |
| Phaseolus vulgaris | Chr06 | 5 | CH_pvu_27 | 13 | 14 | 5.77713e-26 |
| Salvia bowleyana | GWHASIU00000003 | 5 | CH_sbo_377 | 5 | 15 | 0.00000243719 |
| Vigna mungo | CM024073.1 | 5 | CH_vmu_177 | 5 | 9 | 0.000000212955 |
| Aquilegia oxysepala | CHR02 | 6 | CH_aox_85 | 6 | 8 | 0.000000000534381 |
| Amborella trichopoda | AmTr_v1.0_scaffold00174 | 6 | CH_atr_271 | 4 | 4 | 0.00000137918 |
| Eucalyptus grandis | Chr02 | 6 | CH_egr_804 | 4 | 4 | 0.000000771714 |
| Fragaria vesca | Fvb2 | 6 | CH_fve_677 | 3 | 3 | 0.000260892 |
| Glycine max | Gm03 | 6 | CH_gma_493 | 5 | 11 | 0.00000995371 |
| Lupinus albus | Lalb_Chr24 | 6 | CH_lal_467 | 4 | 7 | 0.00013677 |
| Lupinus albus | Lalb_Chr07 | 6 | CH_lal_61 | 7 | 7 | 0.000000000000116929 |
| Marchantia polymorpha | scaffold_88 | 6 | CH_mpo_129 | 4 | 13 | 0.0000428085 |
| Nelumbo nucifera | chr6 | 6 | CH_nnu_416 | 4 | 9 | 0.0001023 |
| Phaseolus vulgaris | Chr06 | 6 | CH_pvu_27 | 13 | 14 | 5.77713e-26 |
| Salvia bowleyana | GWHASIU00000003 | 6 | CH_sbo_377 | 5 | 15 | 0.00000243719 |
| Vigna mungo | CM024073.1 | 6 | CH_vmu_177 | 5 | 9 | 0.000000212955 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |