Functional clusters
Information
- Type InterPro
- Description SKP1-like, dimerisation domain superfamily
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Anthoceros agrestis | Sc2ySwM_344 | 5 | CH_aag_87 | 5 | 15 | 0.0000000610263 |
| Camellia sinensis var. sinensis | Chr1 | 5 | CH_camsi_428 | 5 | 43 | 0.0000000251328 |
| Carpinus fangiana | Cfa02 | 5 | CH_cfa_308 | 3 | 3 | 0.00000313183 |
| Erigeron canadensis | Conyza_canadensis_scaffold:4 | 5 | CH_eca_243 | 7 | 77 | 0.0000000562331 |
| Erigeron canadensis | Conyza_canadensis_scaffold:4 | 5 | CH_eca_650 | 3 | 4 | 0.000159892 |
| Punica granatum | NC_045132.1 | 5 | CH_pgr_347 | 3 | 4 | 0.00000965896 |
| Papaver somniferum | NC_039358.1 | 5 | CH_pso_82 | 8 | 11 | 7.35339e-18 |
| Sequoiadendron giganteum | chr5 | 5 | CH_sgi_557 | 5 | 12 | 0.0000000000084241 |
| Solanum tuberosum | ST4.03ch12 | 5 | CH_stu_142 | 6 | 8 | 0.00000000000043318 |
| Solanum tuberosum | ST4.03ch11 | 5 | CH_stu_245 | 6 | 24 | 0.0000000020596 |
| Anthoceros agrestis | Sc2ySwM_344 | 6 | CH_aag_87 | 5 | 15 | 0.0000000610263 |
| Camellia sinensis var. sinensis | Chr1 | 6 | CH_camsi_428 | 5 | 43 | 0.0000000251328 |
| Carpinus fangiana | Cfa02 | 6 | CH_cfa_308 | 3 | 3 | 0.00000313183 |
| Erigeron canadensis | Conyza_canadensis_scaffold:4 | 6 | CH_eca_243 | 7 | 77 | 0.0000000562331 |
| Erigeron canadensis | Conyza_canadensis_scaffold:4 | 6 | CH_eca_650 | 3 | 4 | 0.000159892 |
| Punica granatum | NC_045132.1 | 6 | CH_pgr_347 | 3 | 4 | 0.00000965896 |
| Papaver somniferum | NC_039358.1 | 6 | CH_pso_82 | 8 | 11 | 7.35339e-18 |
| Sequoiadendron giganteum | chr5 | 6 | CH_sgi_557 | 5 | 12 | 0.0000000000084241 |
| Solanum tuberosum | ST4.03ch12 | 6 | CH_stu_142 | 6 | 8 | 0.00000000000043318 |
| Solanum tuberosum | ST4.03ch11 | 6 | CH_stu_245 | 6 | 24 | 0.0000000020596 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |