Functional clusters
Information
- Type InterPro
- Description Glutathione S-transferase, C-terminal domain superfamily
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Amborella trichopoda | AmTr_v1.0_scaffold00027 | 5 | CH_atr_30 | 12 | 28 | 3.08351e-21 |
| Brassica carinata | ChrB06 | 5 | CH_bca_1530 | 4 | 9 | 0.000196793 |
| Brassica carinata | ChrC02 | 5 | CH_bca_349 | 5 | 5 | 0.000000003147 |
| Brassica napus | C04 | 5 | CH_bna_404 | 5 | 7 | 0.0000000472653 |
| Brassica rapa | A10 | 5 | CH_bra_196 | 4 | 4 | 0.000000606591 |
| Brassica rapa | A07 | 5 | CH_bra_90 | 5 | 5 | 0.00000000111987 |
| Camellia sinensis var. sinensis | Chr11 | 5 | CH_camsi_629 | 4 | 4 | 0.000000844592 |
| Citrus clementina | scaffold_3 | 5 | CH_ccl_360 | 5 | 8 | 0.000000828661 |
| Citrus clementina | scaffold_4 | 5 | CH_ccl_454 | 4 | 5 | 0.0000210988 |
| Carica papaya | supercontig_77 | 5 | CH_cpa_229 | 4 | 7 | 0.0000100537 |
| Eutrema salsugineum | scaffold_8 | 5 | CH_esa_541 | 4 | 15 | 0.000925503 |
| Fragaria vesca | Fvb3 | 5 | CH_fve_70 | 9 | 18 | 0.0000000000000012366 |
| Glycine max | Gm01 | 5 | CH_gma_844 | 3 | 3 | 0.00044118 |
| Lonicera japonica | GWHAAZE00000007 | 5 | CH_lonja_624 | 4 | 6 | 0.00000821583 |
| Magnolia biondii | Chr06 | 5 | CH_mbi_492 | 4 | 5 | 0.000000678067 |
| Malus domestica | Chr10 | 5 | CH_mdo_167 | 7 | 12 | 0.00000000000294659 |
| Nelumbo nucifera | chr1 | 5 | CH_nnu_22 | 9 | 11 | 2.40235e-20 |
| Petunia axillaris | Peaxi162Scf00132 | 5 | CH_pax_259 | 4 | 4 | 0.00000085093 |
| Quercus lobata | 6 | 5 | CH_qlo_517 | 7 | 11 | 0.000000000149868 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 5 | CH_rch_552 | 6 | 20 | 0.0000000699997 |
| Salvia bowleyana | GWHASIU00000005 | 5 | CH_sbo_280 | 4 | 4 | 0.0000000549826 |
| Sequoiadendron giganteum | chr8 | 5 | CH_sgi_1181 | 5 | 9 | 0.000000358728 |
| Vigna mungo | CM024072.1 | 5 | CH_vmu_480 | 3 | 3 | 0.000214309 |
| Zea mays | 3 | 5 | CH_zma_39 | 7 | 7 | 0.00000000000000447214 |
| Amborella trichopoda | AmTr_v1.0_scaffold00027 | 6 | CH_atr_30 | 12 | 28 | 3.08351e-21 |
| Brassica carinata | ChrB06 | 6 | CH_bca_1530 | 4 | 9 | 0.000196793 |
| Brassica carinata | ChrC02 | 6 | CH_bca_349 | 5 | 5 | 0.000000003147 |
| Brassica napus | C04 | 6 | CH_bna_404 | 5 | 7 | 0.0000000472653 |
| Brassica rapa | A10 | 6 | CH_bra_196 | 4 | 4 | 0.000000606591 |
| Brassica rapa | A07 | 6 | CH_bra_90 | 5 | 5 | 0.00000000111987 |
| Camellia sinensis var. sinensis | Chr11 | 6 | CH_camsi_629 | 4 | 4 | 0.000000844592 |
| Citrus clementina | scaffold_3 | 6 | CH_ccl_360 | 5 | 8 | 0.000000828661 |
| Citrus clementina | scaffold_4 | 6 | CH_ccl_454 | 4 | 5 | 0.0000210988 |
| Carica papaya | supercontig_77 | 6 | CH_cpa_229 | 4 | 7 | 0.0000100537 |
| Eutrema salsugineum | scaffold_8 | 6 | CH_esa_541 | 4 | 15 | 0.000925503 |
| Fragaria x ananassa | Fvb5-1 | 6 | CH_fan_1134 | 3 | 3 | 0.000615343 |
| Fragaria x ananassa | Fvb3-2 | 6 | CH_fan_1135 | 3 | 3 | 0.000615343 |
| Fragaria vesca | Fvb3 | 6 | CH_fve_70 | 9 | 18 | 0.0000000000000012366 |
| Glycine max | Gm01 | 6 | CH_gma_844 | 3 | 3 | 0.00044118 |
| Lonicera japonica | GWHAAZE00000007 | 6 | CH_lonja_624 | 4 | 6 | 0.00000821583 |
| Magnolia biondii | Chr06 | 6 | CH_mbi_492 | 4 | 5 | 0.000000678067 |
| Malus domestica | Chr10 | 6 | CH_mdo_167 | 7 | 12 | 0.00000000000294659 |
| Nelumbo nucifera | chr1 | 6 | CH_nnu_22 | 9 | 11 | 2.40235e-20 |
| Petunia axillaris | Peaxi162Scf00132 | 6 | CH_pax_259 | 4 | 4 | 0.00000085093 |
| Quercus lobata | 6 | 6 | CH_qlo_517 | 7 | 11 | 0.000000000149868 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 6 | CH_rch_552 | 6 | 20 | 0.0000000699997 |
| Salvia bowleyana | GWHASIU00000005 | 6 | CH_sbo_280 | 4 | 4 | 0.0000000549826 |
| Sequoiadendron giganteum | chr8 | 6 | CH_sgi_1181 | 5 | 9 | 0.000000358728 |
| Vigna mungo | CM024072.1 | 6 | CH_vmu_480 | 3 | 3 | 0.000214309 |
| Zea mays | 3 | 6 | CH_zma_39 | 7 | 7 | 0.00000000000000447214 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |