Functional clusters

Information

  • Type InterPro
  • Description MIT domain superfamily

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.18 5 CH_arhy_1172 2 2 0.000449075
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.08 5 CH_arhy_1173 2 2 0.000449075
Brassica carinata ChrB07 5 CH_bca_1683 2 2 0.000320646
Carya illinoinensis Chr13 5 CH_cil_733 2 4 0.000371874
Lotus japonicus chr3 5 CH_lja_476 2 2 0.000214523
Magnolia biondii Chr05 5 CH_mbi_451 3 9 0.000000297156
Oryza sativa ssp. japonica chr01 5 CH_osa_696 2 4 0.000475289
Quercus lobata 4 5 CH_qlo_1192 4 38 0.0000412452
Solanum lycopersicum SL4.0ch11 5 CH_sly_734 2 2 0.000176082
Solanum pennellii Spenn-ch11 5 CH_spe_658 2 2 0.000133437
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.18 6 CH_arhy_1172 2 2 0.000449075
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.08 6 CH_arhy_1173 2 2 0.000449075
Brassica carinata ChrB07 6 CH_bca_1683 2 2 0.000320646
Carya illinoinensis Chr13 6 CH_cil_733 2 4 0.000371874
Cucumis melo chr11 6 CH_cme_313 2 2 0.0000667111
Lotus japonicus chr3 6 CH_lja_476 2 2 0.000214523
Magnolia biondii Chr05 6 CH_mbi_451 3 9 0.000000297156
Oryza sativa ssp. japonica chr01 6 CH_osa_696 2 4 0.000475289
Quercus lobata 4 6 CH_qlo_1192 4 38 0.0000412452
Solanum lycopersicum SL4.0ch11 6 CH_sly_734 2 2 0.000176082
Solanum pennellii Spenn-ch11 6 CH_spe_658 2 2 0.000133437

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001