Functional clusters
Information
- Type InterPro
- Description Heavy metal-associated domain superfamily
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Anthoceros agrestis | Sc2ySwM_369 | 5 | CH_aag_17 | 8 | 13 | 1.92503e-17 |
| Anthoceros agrestis | Sc2ySwM_340 | 5 | CH_aag_42 | 6 | 9 | 0.00000000000185934 |
| Coffea canephora | chr9 | 5 | CH_ccan_574 | 3 | 21 | 0.000279785 |
| Carya illinoinensis | Chr10 | 5 | CH_cil_210 | 6 | 7 | 0.00000000012497 |
| Davidia involucrata | GWHABJS00000016 | 5 | CH_din_618 | 4 | 10 | 0.000208425 |
| Durio zibethinus | NW_019168037.1 | 5 | CH_dzi_322 | 4 | 6 | 0.0000136182 |
| Glycine max | Gm09 | 5 | CH_gma_841 | 4 | 9 | 0.000403114 |
| Lactuca sativa | Lsat_1_v8_lg_7 | 5 | CH_lsa_745 | 3 | 3 | 0.000278609 |
| Marchantia polymorpha | scaffold_25 | 5 | CH_mpo_223 | 3 | 4 | 0.000967617 |
| Nelumbo nucifera | chr5 | 5 | CH_nnu_266 | 4 | 5 | 0.00000238797 |
| Petunia axillaris | Peaxi162Scf00811 | 5 | CH_pax_585 | 3 | 3 | 0.000309361 |
| Physcomitrium patens | Chr25 | 5 | CH_ppa_6 | 8 | 11 | 0.0000000000000286531 |
| Populus trichocarpa | Chr06 | 5 | CH_ptr_36 | 13 | 18 | 8.74361e-25 |
| Sechium edule | LG05 | 5 | CH_sed_119 | 5 | 5 | 0.0000000106668 |
| Sequoiadendron giganteum | chr4 | 5 | CH_sgi_171 | 10 | 13 | 4.73108e-22 |
| Trochodendron aralioides | group9 | 5 | CH_tar_436 | 4 | 6 | 0.0000178271 |
| Theobroma cacao | Chromosome_6 | 5 | CH_tca_190 | 6 | 9 | 0.000000000243599 |
| Tripterygium wilfordii | NC_052252.1 | 5 | CH_twi_273 | 4 | 5 | 0.00000662911 |
| Vitis vinifera | chrUn | 5 | CH_vvi_151 | 6 | 7 | 0.0000000000300183 |
| Anthoceros agrestis | Sc2ySwM_369 | 6 | CH_aag_17 | 8 | 13 | 1.92503e-17 |
| Anthoceros agrestis | Sc2ySwM_340 | 6 | CH_aag_42 | 6 | 9 | 0.00000000000185934 |
| Coffea canephora | chr9 | 6 | CH_ccan_574 | 3 | 21 | 0.000279785 |
| Carya illinoinensis | Chr10 | 6 | CH_cil_210 | 6 | 7 | 0.00000000012497 |
| Davidia involucrata | GWHABJS00000016 | 6 | CH_din_618 | 4 | 10 | 0.000208425 |
| Durio zibethinus | NW_019168037.1 | 6 | CH_dzi_322 | 4 | 6 | 0.0000136182 |
| Glycine max | Gm09 | 6 | CH_gma_841 | 4 | 9 | 0.000403114 |
| Lactuca sativa | Lsat_1_v8_lg_7 | 6 | CH_lsa_745 | 3 | 3 | 0.000278609 |
| Marchantia polymorpha | scaffold_25 | 6 | CH_mpo_223 | 3 | 4 | 0.000967617 |
| Nelumbo nucifera | chr5 | 6 | CH_nnu_266 | 4 | 5 | 0.00000238797 |
| Petunia axillaris | Peaxi162Scf00811 | 6 | CH_pax_585 | 3 | 3 | 0.000309361 |
| Physcomitrium patens | Chr25 | 6 | CH_ppa_6 | 8 | 11 | 0.0000000000000286531 |
| Populus trichocarpa | Chr06 | 6 | CH_ptr_36 | 13 | 18 | 8.74361e-25 |
| Sechium edule | LG05 | 6 | CH_sed_119 | 5 | 5 | 0.0000000106668 |
| Sequoiadendron giganteum | chr4 | 6 | CH_sgi_171 | 10 | 13 | 4.73108e-22 |
| Trochodendron aralioides | group9 | 6 | CH_tar_436 | 4 | 6 | 0.0000178271 |
| Theobroma cacao | Chromosome_6 | 6 | CH_tca_190 | 6 | 9 | 0.000000000243599 |
| Tripterygium wilfordii | NC_052252.1 | 6 | CH_twi_273 | 4 | 5 | 0.00000662911 |
| Vitis vinifera | chrUn | 6 | CH_vvi_151 | 6 | 7 | 0.0000000000300183 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |