Functional clusters

Information

  • Type InterPro
  • Description F-box-like domain superfamily

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_368 5 CH_aag_145 7 16 0.00000807958
Acer truncatum chr6 5 CH_acertr_405 6 11 0.00000393488
Aquilegia oxysepala CHR07 5 CH_aox_375 5 5 0.000141159
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.19 5 CH_arhy_37 24 42 4.39078e-32
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.09 5 CH_arhy_64 20 41 3.01062e-24
Amborella trichopoda AmTr_v1.0_scaffold00040 5 CH_atr_310 5 7 0.00000976186
Brassica napus C03 5 CH_bna_1091 7 14 0.000124925
Beta vulgaris Chr4_EL10_PGA_scaffold1 5 CH_bvu_247 5 5 0.00000184957
Beta vulgaris Chr2_EL10_PGA_scaffold6 5 CH_bvu_394 4 4 0.000196805
Camellia sinensis var. sinensis Chr9 5 CH_camsi_1507 5 13 0.000925579
Camellia sinensis var. sinensis Chr6 5 CH_camsi_219 9 15 0.00000000000841071
Camellia sinensis var. sinensis Chr8 5 CH_camsi_470 7 13 0.0000000603785
Camellia sinensis var. sinensis Chr10 5 CH_camsi_521 6 8 0.000000145333
Cannabis sativa NC_044375.1 5 CH_cansat_73 14 55 0.000000000000566216
Capsicum annuum PGAv.1.6.scaffold500 5 CH_can_120 15 40 0.000000000000265919
Capsicum annuum PGAv.1.6.scaffold635 5 CH_can_306 7 9 0.000000147521
Capsicum annuum PGAv.1.6.scaffold184 5 CH_can_382 6 7 0.00000194919
Capsicum annuum PGAv.1.6.scaffold424 5 CH_can_397 8 18 0.00000239689
Capsicum annuum PGAv.1.6.scaffold222 5 CH_can_523 10 49 0.0000665811
Chara braunii BFEA01000144 5 CH_cbr_359 4 10 0.000766402
Coffea canephora chr3 5 CH_ccan_416 5 59 0.0000691387
Citrus clementina scaffold_6 5 CH_ccl_746 4 4 0.000649711
Cardamine hirsuta Chr7 5 CH_chi_544 10 34 0.0000836112
Corchorus olitorius AWUE01020860.1 5 CH_col_61 9 19 0.00000013047
Chenopodium quinoa C_Quinoa_Scaffold_1529 5 CH_cqu_114 12 20 0.000000000000161264
Chenopodium quinoa C_Quinoa_Scaffold_3514 5 CH_cqu_252 8 11 0.00000000717662
Chenopodium quinoa C_Quinoa_Scaffold_3422 5 CH_cqu_301 13 61 0.0000000678779
Capsella rubella scaffold_2 5 CH_cru_571 12 46 0.000431813
Daucus carota DCARv2_Chr3 5 CH_dca_389 6 12 0.0000506994
Davidia involucrata GWHABJS00000016 5 CH_din_445 7 21 0.000048056
Davidia involucrata GWHABJS00000009 5 CH_din_703 4 4 0.000444043
Durio zibethinus NW_019167926.1 5 CH_dzi_278 5 5 0.00000240845
Erigeron canadensis Conyza_canadensis_scaffold:1 5 CH_eca_271 11 50 0.000000142129
Erigeron canadensis Conyza_canadensis_scaffold:6 5 CH_eca_493 5 6 0.000030051
Erigeron canadensis Conyza_canadensis_scaffold:4 5 CH_eca_663 7 25 0.000214112
Erythranthe guttata scaffold_5 5 CH_egut_24 30 47 1.66466e-32
Erythranthe guttata scaffold_1 5 CH_egut_279 11 24 0.0000000994553
Erythranthe guttata scaffold_10 5 CH_egut_623 5 5 0.000249913
Erythranthe guttata scaffold_5 5 CH_egut_737 8 22 0.000864864
Fragaria vesca Fvb6 5 CH_fve_314 9 14 0.0000000744333
Fragaria vesca Fvb6 5 CH_fve_449 11 35 0.00000503711
Fragaria vesca Fvb6 5 CH_fve_658 5 5 0.000177469
Fragaria vesca Fvb7 5 CH_fve_681 6 9 0.000309442
Gossypium hirsutum D05 5 CH_ghi_423 6 6 0.0000000321415
Glycine max Gm18 5 CH_gma_184 12 47 0.000000000327941
Helianthus annuus HanXRQChr17 5 CH_han_15 28 51 1.39428e-31
Helianthus annuus HanXRQChr07 5 CH_han_199 16 48 0.00000000000310344
Helianthus annuus HanXRQChr12 5 CH_han_529 7 9 0.000000737253
Helianthus annuus HanXRQChr17 5 CH_han_585 7 10 0.00000242112
Helianthus annuus HanXRQChr16 5 CH_han_65 24 74 1.07162e-19
Lotus japonicus chr1 5 CH_lja_56 9 10 0.00000000000187839
Lonicera japonica GWHAAZE00000008 5 CH_lonja_258 9 11 0.0000000000443232
Lonicera japonica GWHAAZE00000006 5 CH_lonja_491 7 10 0.000000475178
Lonicera japonica GWHAAZE00000006 5 CH_lonja_85 24 77 3.23128e-21
Lonicera japonica GWHAAZE00000002 5 CH_lonja_983 6 12 0.000248071
Lactuca sativa Lsat_1_v8_lg_7 5 CH_lsa_128 11 16 0.000000000000611545
Lactuca sativa Lsat_1_v8_lg_5 5 CH_lsa_271 8 11 0.00000000896764
Lactuca sativa Lsat_1_v8_lg_7 5 CH_lsa_310 9 18 0.0000000339434
Magnolia biondii Chr15 5 CH_mbi_307 7 15 0.0000000110108
Magnolia biondii Chr07 5 CH_mbi_48 13 24 3.19658e-20
Magnolia biondii Chr17 5 CH_mbi_660 6 20 0.0000143492
Malus domestica Chr14 5 CH_mdo_61 15 32 2.25955e-18
Medicago truncatula chr3 5 CH_mtr_1370 11 48 0.000700131
Medicago truncatula chr2 5 CH_mtr_188 22 69 0.0000000000000182795
Medicago truncatula chr7 5 CH_mtr_596 17 79 0.000000244591
Medicago truncatula chr7 5 CH_mtr_640 9 15 0.000000542962
Medicago truncatula chr3 5 CH_mtr_746 9 17 0.00000252555
Medicago truncatula chr3 5 CH_mtr_987 6 7 0.0000625716
Nicotiana tabacum Nitab4.5_0000306 5 CH_nta_131 7 17 0.00000321921
Nicotiana tabacum Nitab4.5_0000149 5 CH_nta_172 5 7 0.0000384119
Oryza sativa ssp. japonica chr10 5 CH_osa_140 15 59 0.000000000055326
Oryza sativa ssp. japonica chr08 5 CH_osa_23 18 27 2.16339e-23
Oryza sativa ssp. japonica chr11 5 CH_osa_53 21 79 4.00101e-17
Petunia axillaris Peaxi162Scf00179 5 CH_pax_20 16 26 1.99583e-18
Petunia axillaris Peaxi162Scf00124 5 CH_pax_320 8 19 0.00000771813
Petunia axillaris Peaxi162Scf00188 5 CH_pax_95 9 11 0.000000000100768
Punica granatum NC_045127.1 5 CH_pgr_161 7 9 0.00000000263056
Punica granatum NC_045133.1 5 CH_pgr_189 7 11 0.0000000237677
Prunus persica Pp03 5 CH_ppe_514 6 9 0.0000171982
Prunus persica Pp07 5 CH_ppe_657 9 43 0.000211974
Pisum sativum chr3LG5 5 CH_psa_106 7 7 0.000000000101285
Pisum sativum chr6LG2 5 CH_psa_387 7 23 0.0000221319
Papaver somniferum NC_039365.1 5 CH_pso_1068 6 10 0.000311374
Quercus lobata 7 5 CH_qlo_1734 5 6 0.000518281
Rosa chinensis RcHm_v2.0_Chr3 5 CH_rch_1264 11 76 0.000260737
Rosa chinensis RcHm_v2.0_Chr3 5 CH_rch_134 16 32 1.79181e-17
Rosa chinensis RcHm_v2.0_Chr6 5 CH_rch_808 9 29 0.00000462115
Rhododendron simsii chr13 5 CH_rsi_33 23 38 2.08284e-28
Rhododendron simsii chr11 5 CH_rsi_416 9 20 0.000000148393
Rhododendron simsii chr06 5 CH_rsi_531 7 12 0.00000354245
Rhododendron simsii chr04 5 CH_rsi_597 5 5 0.0000220843
Striga asiatica scaffold37 5 CH_sas_11 9 13 0.0000000000352972
Striga asiatica scaffold70 5 CH_sas_17 8 10 0.000000000217399
Salvia bowleyana GWHASIU00000007 5 CH_sbo_18 27 58 1.05063e-36
Salvia bowleyana GWHASIU00000001 5 CH_sbo_19 25 44 1.093e-36
Salvia bowleyana GWHASIU00000007 5 CH_sbo_6 27 33 5.31337e-47
Salvia bowleyana GWHASIU00000004 5 CH_sbo_608 4 4 0.000183851
Salix brachista GWHAAZH00000015 5 CH_sbr_228 11 54 0.0000000484585
Simmondsia chinensis GWHAASQ00000013 5 CH_sci_84 10 35 0.0000000030679
Sechium edule LG07 5 CH_sed_367 4 4 0.000149346
Sequoiadendron giganteum chr4 5 CH_sgi_103 16 21 2.31782e-27
Sequoiadendron giganteum chr2 5 CH_sgi_1180 5 5 0.00000035774
Sequoiadendron giganteum chr8 5 CH_sgi_1539 7 31 0.0000303549
Sequoiadendron giganteum chr6 5 CH_sgi_193 15 32 1.03586e-20
Solanum lycopersicum SL4.0ch07 5 CH_sly_756 4 4 0.000190134
Solanum lycopersicum SL4.0ch08 5 CH_sly_760 5 9 0.000199507
Schrenkiella parvula ch6-1 5 CH_spa_343 5 9 0.000476014
Solanum pennellii Spenn-ch07 5 CH_spe_342 5 5 0.000000656362
Solanum pennellii Spenn-ch08 5 CH_spe_470 5 7 0.0000136286
Solanum tuberosum ST4.03ch08 5 CH_stu_511 5 5 0.0000138801
Selenicereus undatus Scaffold_3410 5 CH_sun_38 6 6 0.000000000706768
Trochodendron aralioides group13 5 CH_tar_108 9 13 0.0000000000396437
Trochodendron aralioides group0 5 CH_tar_573 5 7 0.0000957955
Theobroma cacao Chromosome_5 5 CH_tca_271 6 6 0.0000000320818
Theobroma cacao Chromosome_10 5 CH_tca_385 11 64 0.00000151866
Trifolium pratense Tp57577_TGAC_v2_LG3 5 CH_tpr_186 10 31 0.0000000342635
Anthoceros agrestis Sc2ySwM_368 6 CH_aag_145 7 16 0.00000807958
Acer truncatum chr6 6 CH_acertr_405 6 11 0.00000393488
Aquilegia oxysepala CHR07 6 CH_aox_375 5 5 0.000141159
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.19 6 CH_arhy_37 24 42 4.39078e-32
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.09 6 CH_arhy_64 20 41 3.01062e-24
Amborella trichopoda AmTr_v1.0_scaffold00040 6 CH_atr_310 5 7 0.00000976186
Brassica napus C03 6 CH_bna_1091 7 14 0.000124925
Beta vulgaris Chr4_EL10_PGA_scaffold1 6 CH_bvu_247 5 5 0.00000184957
Beta vulgaris Chr2_EL10_PGA_scaffold6 6 CH_bvu_394 4 4 0.000196805
Camellia sinensis var. sinensis Chr9 6 CH_camsi_1507 5 13 0.000925579
Camellia sinensis var. sinensis Chr6 6 CH_camsi_219 9 15 0.00000000000841071
Camellia sinensis var. sinensis Chr8 6 CH_camsi_470 7 13 0.0000000603785
Camellia sinensis var. sinensis Chr10 6 CH_camsi_521 6 8 0.000000145333
Cannabis sativa NC_044375.1 6 CH_cansat_73 14 55 0.000000000000566216
Capsicum annuum PGAv.1.6.scaffold500 6 CH_can_120 15 40 0.000000000000265919
Capsicum annuum PGAv.1.6.scaffold635 6 CH_can_306 7 9 0.000000147521
Capsicum annuum PGAv.1.6.scaffold184 6 CH_can_382 6 7 0.00000194919
Capsicum annuum PGAv.1.6.scaffold424 6 CH_can_397 8 18 0.00000239689
Capsicum annuum PGAv.1.6.scaffold222 6 CH_can_523 10 49 0.0000665811
Chara braunii BFEA01000144 6 CH_cbr_359 4 10 0.000766402
Coffea canephora chr3 6 CH_ccan_416 5 59 0.0000691387
Citrus clementina scaffold_6 6 CH_ccl_746 4 4 0.000649711
Cardamine hirsuta Chr7 6 CH_chi_544 10 34 0.0000836112
Corchorus olitorius AWUE01020860.1 6 CH_col_61 9 19 0.00000013047
Chenopodium quinoa C_Quinoa_Scaffold_1529 6 CH_cqu_114 12 20 0.000000000000161264
Chenopodium quinoa C_Quinoa_Scaffold_3514 6 CH_cqu_252 8 11 0.00000000717662
Chenopodium quinoa C_Quinoa_Scaffold_3422 6 CH_cqu_301 13 61 0.0000000678779
Capsella rubella scaffold_2 6 CH_cru_571 12 46 0.000431813
Daucus carota DCARv2_Chr3 6 CH_dca_389 6 12 0.0000506994
Davidia involucrata GWHABJS00000016 6 CH_din_445 7 21 0.000048056
Davidia involucrata GWHABJS00000009 6 CH_din_703 4 4 0.000444043
Durio zibethinus NW_019167926.1 6 CH_dzi_278 5 5 0.00000240845
Erigeron canadensis Conyza_canadensis_scaffold:1 6 CH_eca_271 11 50 0.000000142129
Erigeron canadensis Conyza_canadensis_scaffold:6 6 CH_eca_493 5 6 0.000030051
Erigeron canadensis Conyza_canadensis_scaffold:4 6 CH_eca_663 7 25 0.000214112
Erythranthe guttata scaffold_5 6 CH_egut_24 30 47 1.66466e-32
Erythranthe guttata scaffold_1 6 CH_egut_279 11 24 0.0000000994553
Erythranthe guttata scaffold_10 6 CH_egut_623 5 5 0.000249913
Erythranthe guttata scaffold_5 6 CH_egut_737 8 22 0.000864864
Fragaria x ananassa Fvb3-4 6 CH_fan_1059 11 63 0.000494837
Fragaria vesca Fvb6 6 CH_fve_314 9 14 0.0000000744333
Fragaria vesca Fvb6 6 CH_fve_449 11 35 0.00000503711
Fragaria vesca Fvb6 6 CH_fve_658 5 5 0.000177469
Fragaria vesca Fvb7 6 CH_fve_681 6 9 0.000309442
Gossypium hirsutum D05 6 CH_ghi_423 6 6 0.0000000321415
Glycine max Gm18 6 CH_gma_184 12 47 0.000000000327941
Helianthus annuus HanXRQChr17 6 CH_han_15 28 51 1.39428e-31
Helianthus annuus HanXRQChr07 6 CH_han_199 16 48 0.00000000000310344
Helianthus annuus HanXRQChr12 6 CH_han_529 7 9 0.000000737253
Helianthus annuus HanXRQChr17 6 CH_han_585 7 10 0.00000242112
Helianthus annuus HanXRQChr16 6 CH_han_65 24 74 1.07162e-19
Lotus japonicus chr1 6 CH_lja_56 9 10 0.00000000000187839
Lonicera japonica GWHAAZE00000008 6 CH_lonja_258 9 11 0.0000000000443232
Lonicera japonica GWHAAZE00000006 6 CH_lonja_491 7 10 0.000000475178
Lonicera japonica GWHAAZE00000006 6 CH_lonja_85 24 77 3.23128e-21
Lonicera japonica GWHAAZE00000002 6 CH_lonja_983 6 12 0.000248071
Lactuca sativa Lsat_1_v8_lg_7 6 CH_lsa_128 11 16 0.000000000000611545
Lactuca sativa Lsat_1_v8_lg_5 6 CH_lsa_271 8 11 0.00000000896764
Lactuca sativa Lsat_1_v8_lg_7 6 CH_lsa_310 9 18 0.0000000339434
Magnolia biondii Chr15 6 CH_mbi_307 7 15 0.0000000110108
Magnolia biondii Chr07 6 CH_mbi_48 13 24 3.19658e-20
Magnolia biondii Chr17 6 CH_mbi_660 6 20 0.0000143492
Malus domestica Chr14 6 CH_mdo_61 15 32 2.25955e-18
Medicago truncatula chr3 6 CH_mtr_1370 11 48 0.000700131
Medicago truncatula chr2 6 CH_mtr_188 22 69 0.0000000000000182795
Medicago truncatula chr7 6 CH_mtr_596 17 79 0.000000244591
Medicago truncatula chr7 6 CH_mtr_640 9 15 0.000000542962
Medicago truncatula chr3 6 CH_mtr_746 9 17 0.00000252555
Medicago truncatula chr3 6 CH_mtr_987 6 7 0.0000625716
Nicotiana tabacum Nitab4.5_0000306 6 CH_nta_131 7 17 0.00000321921
Nicotiana tabacum Nitab4.5_0000149 6 CH_nta_172 5 7 0.0000384119
Oryza sativa ssp. japonica chr10 6 CH_osa_140 15 59 0.000000000055326
Oryza sativa ssp. japonica chr08 6 CH_osa_23 18 27 2.16339e-23
Oryza sativa ssp. japonica chr11 6 CH_osa_53 21 79 4.00101e-17
Petunia axillaris Peaxi162Scf00179 6 CH_pax_20 16 26 1.99583e-18
Petunia axillaris Peaxi162Scf00124 6 CH_pax_320 8 19 0.00000771813
Petunia axillaris Peaxi162Scf00188 6 CH_pax_95 9 11 0.000000000100768
Punica granatum NC_045127.1 6 CH_pgr_161 7 9 0.00000000263056
Punica granatum NC_045133.1 6 CH_pgr_189 7 11 0.0000000237677
Prunus persica Pp03 6 CH_ppe_514 6 9 0.0000171982
Prunus persica Pp07 6 CH_ppe_657 9 43 0.000211974
Pisum sativum chr3LG5 6 CH_psa_106 7 7 0.000000000101285
Pisum sativum chr6LG2 6 CH_psa_387 7 23 0.0000221319
Papaver somniferum NC_039365.1 6 CH_pso_1068 6 10 0.000311374
Quercus lobata 7 6 CH_qlo_1734 5 6 0.000518281
Rosa chinensis RcHm_v2.0_Chr3 6 CH_rch_1264 11 76 0.000260737
Rosa chinensis RcHm_v2.0_Chr3 6 CH_rch_134 16 32 1.79181e-17
Rosa chinensis RcHm_v2.0_Chr6 6 CH_rch_808 9 29 0.00000462115
Rhododendron simsii chr13 6 CH_rsi_33 23 38 2.08284e-28
Rhododendron simsii chr11 6 CH_rsi_416 9 20 0.000000148393
Rhododendron simsii chr06 6 CH_rsi_531 7 12 0.00000354245
Rhododendron simsii chr04 6 CH_rsi_597 5 5 0.0000220843
Striga asiatica scaffold37 6 CH_sas_11 9 13 0.0000000000352972
Striga asiatica scaffold70 6 CH_sas_17 8 10 0.000000000217399
Salvia bowleyana GWHASIU00000007 6 CH_sbo_18 27 58 1.05063e-36
Salvia bowleyana GWHASIU00000001 6 CH_sbo_19 25 44 1.093e-36
Salvia bowleyana GWHASIU00000007 6 CH_sbo_6 27 33 5.31337e-47
Salvia bowleyana GWHASIU00000004 6 CH_sbo_608 4 4 0.000183851
Salix brachista GWHAAZH00000015 6 CH_sbr_228 11 54 0.0000000484585
Simmondsia chinensis GWHAASQ00000013 6 CH_sci_84 10 35 0.0000000030679
Sechium edule LG07 6 CH_sed_367 4 4 0.000149346
Sequoiadendron giganteum chr4 6 CH_sgi_103 16 21 2.31782e-27
Sequoiadendron giganteum chr2 6 CH_sgi_1180 5 5 0.00000035774
Sequoiadendron giganteum chr8 6 CH_sgi_1539 7 31 0.0000303549
Sequoiadendron giganteum chr6 6 CH_sgi_193 15 32 1.03586e-20
Solanum lycopersicum SL4.0ch07 6 CH_sly_756 4 4 0.000190134
Solanum lycopersicum SL4.0ch08 6 CH_sly_760 5 9 0.000199507
Schrenkiella parvula ch6-1 6 CH_spa_343 5 9 0.000476014
Solanum pennellii Spenn-ch07 6 CH_spe_342 5 5 0.000000656362
Solanum pennellii Spenn-ch08 6 CH_spe_470 5 7 0.0000136286
Solanum tuberosum ST4.03ch08 6 CH_stu_511 5 5 0.0000138801
Selenicereus undatus Scaffold_3410 6 CH_sun_38 6 6 0.000000000706768
Trochodendron aralioides group13 6 CH_tar_108 9 13 0.0000000000396437
Trochodendron aralioides group0 6 CH_tar_573 5 7 0.0000957955
Theobroma cacao Chromosome_5 6 CH_tca_271 6 6 0.0000000320818
Theobroma cacao Chromosome_10 6 CH_tca_385 11 64 0.00000151866
Trifolium pratense Tp57577_TGAC_v2_LG3 6 CH_tpr_186 10 31 0.0000000342635

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001