Functional clusters

Information

  • Type InterPro
  • Description Aminotransferase-like, PLP-dependent enzymes

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr13 5 CH_acertr_198 4 6 0.00000000780098
Corylus avellana 9 5 CH_cav_393 3 5 0.0000105761
Glycine max Gm08 5 CH_gma_230 4 5 0.00000000317851
Lotus japonicus chr1 5 CH_lja_432 3 10 0.00011028
Prunus persica Pp01 5 CH_ppe_413 3 3 0.00000137729
Quercus lobata CM012294 5 CH_qlo_1026 3 4 0.0000035179
Rosa chinensis RcHm_v2.0_Chr3 5 CH_rch_861 3 5 0.0000108424
Sequoiadendron giganteum chr3 5 CH_sgi_2587 2 2 0.000730727
Vanilla planifolia CM028150.1 5 CH_vpl_126 4 7 0.000000057759
Acer truncatum chr13 6 CH_acertr_198 4 6 0.00000000780098
Corylus avellana 9 6 CH_cav_393 3 5 0.0000105761
Glycine max Gm08 6 CH_gma_230 4 5 0.00000000317851
Lotus japonicus chr1 6 CH_lja_432 3 10 0.00011028
Prunus persica Pp01 6 CH_ppe_413 3 3 0.00000137729
Quercus lobata CM012294 6 CH_qlo_1026 3 4 0.0000035179
Rosa chinensis RcHm_v2.0_Chr3 6 CH_rch_861 3 5 0.0000108424
Sequoiadendron giganteum chr3 6 CH_sgi_2587 2 2 0.000730727
Vanilla planifolia CM028150.1 6 CH_vpl_126 4 7 0.000000057759

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001