Functional clusters
Information
- Type InterPro
- Description PDZ superfamily
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Actinidia chinensis | Lachesis_group21 | 5 | CH_ach_194 | 3 | 3 | 0.0000042891 |
| Ceratophyllum demersum | 1 | 5 | CH_cde_276 | 3 | 5 | 0.000189136 |
| Vaccinium macrocarpon | chr12_Vaccinium_macrocarpon_Stevens_v1 | 5 | CH_vma_278 | 4 | 8 | 0.00000122923 |
| Actinidia chinensis | Lachesis_group21 | 6 | CH_ach_194 | 3 | 3 | 0.0000042891 |
| Ceratophyllum demersum | 1 | 6 | CH_cde_276 | 3 | 5 | 0.000189136 |
| Vaccinium macrocarpon | chr12_Vaccinium_macrocarpon_Stevens_v1 | 6 | CH_vma_278 | 4 | 8 | 0.00000122923 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |