Functional clusters
Information
- Type InterPro
- Description HECT, E3 ligase catalytic domain
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Actinidia chinensis | Lachesis_group24 | 5 | CH_ach_150 | 4 | 10 | 0.000000602998 |
| Manihot esculenta | Chromosome10 | 5 | CH_mes_31 | 13 | 29 | 5.53481e-30 |
| Quercus lobata | 5 | 5 | CH_qlo_318 | 5 | 5 | 0.000000000000024623 |
| Solanum tuberosum | ST4.03ch12 | 5 | CH_stu_471 | 3 | 3 | 0.00000606639 |
| Vanilla planifolia | CM028150.1 | 5 | CH_vpl_281 | 3 | 4 | 0.00000936579 |
| Actinidia chinensis | Lachesis_group24 | 6 | CH_ach_150 | 4 | 10 | 0.000000602998 |
| Manihot esculenta | Chromosome10 | 6 | CH_mes_31 | 13 | 29 | 5.53481e-30 |
| Quercus lobata | 5 | 6 | CH_qlo_318 | 5 | 5 | 0.000000000000024623 |
| Solanum tuberosum | ST4.03ch12 | 6 | CH_stu_471 | 3 | 3 | 0.00000606639 |
| Vanilla planifolia | CM028150.1 | 6 | CH_vpl_281 | 3 | 4 | 0.00000936579 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |