Functional clusters

Information

  • Type InterPro
  • Description ATP synthase, F1 complex, gamma subunit superfamily

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrC02 5 CH_bca_854 3 4 0.00000223697
Brassica napus C06 5 CH_bna_548 3 3 0.000000589161
Cardamine hirsuta Chr4 5 CH_chi_169 4 8 0.00000000103997
Carya illinoinensis Chr11 5 CH_cil_822 2 2 0.000619828
Pisum sativum chr2LG1 5 CH_psa_301 3 6 0.00000163224
Quercus lobata 10 5 CH_qlo_747 3 3 0.0000000399842
Simmondsia chinensis GWHAASQ00000005 5 CH_sci_234 3 8 0.0000212956
Sequoiadendron giganteum chr3 5 CH_sgi_934 3 3 0.0000000142393
Solanum pennellii Spenn-ch05 5 CH_spe_803 2 2 0.00044479
Brassica carinata ChrC02 6 CH_bca_854 3 4 0.00000223697
Brassica napus C06 6 CH_bna_548 3 3 0.000000589161
Cardamine hirsuta Chr4 6 CH_chi_169 4 8 0.00000000103997
Carya illinoinensis Chr11 6 CH_cil_822 2 2 0.000619828
Pisum sativum chr2LG1 6 CH_psa_301 3 6 0.00000163224
Quercus lobata 10 6 CH_qlo_747 3 3 0.0000000399842
Simmondsia chinensis GWHAASQ00000005 6 CH_sci_234 3 8 0.0000212956
Sequoiadendron giganteum chr3 6 CH_sgi_934 3 3 0.0000000142393
Solanum pennellii Spenn-ch05 6 CH_spe_803 2 2 0.00044479

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001