Functional clusters
Information
- Type InterPro
- Description PAS domain superfamily
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr4 | 5 | CH_acertr_437 | 3 | 3 | 0.0000072239 |
| Lonicera japonica | GWHAAZE00000003 | 5 | CH_lonja_566 | 3 | 3 | 0.00000195829 |
| Lactuca sativa | Lsat_1_v8_lg_1 | 5 | CH_lsa_114 | 6 | 11 | 0.000000000000101061 |
| Papaver somniferum | NW_020622934.1 | 5 | CH_pso_861 | 4 | 18 | 0.0000581261 |
| Acer truncatum | chr4 | 6 | CH_acertr_437 | 3 | 3 | 0.0000072239 |
| Lonicera japonica | GWHAAZE00000003 | 6 | CH_lonja_566 | 3 | 3 | 0.00000195829 |
| Lactuca sativa | Lsat_1_v8_lg_1 | 6 | CH_lsa_114 | 6 | 11 | 0.000000000000101061 |
| Papaver somniferum | NW_020622934.1 | 6 | CH_pso_861 | 4 | 18 | 0.0000581261 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |