Functional clusters
Information
- Type InterPro
- Description C2 domain superfamily
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Camellia sinensis var. sinensis | Chr2 | 5 | CH_camsi_516 | 5 | 6 | 0.000000129771 |
| Cardamine hirsuta | NSCAFB.163 | 5 | CH_chi_434 | 4 | 5 | 0.0000264717 |
| Lonicera japonica | GWHAAZE00000007 | 5 | CH_lonja_25 | 23 | 42 | 3.60093e-40 |
| Lactuca sativa | Lsat_1_v8_lg_5 | 5 | CH_lsa_636 | 5 | 16 | 0.0000923492 |
| Prunus persica | Pp02 | 5 | CH_ppe_394 | 6 | 18 | 0.000000920565 |
| Pisum sativum | chr5LG3 | 5 | CH_psa_198 | 5 | 6 | 0.0000000426091 |
| Quercus lobata | 6 | 5 | CH_qlo_1630 | 4 | 8 | 0.000401417 |
| Salix brachista | GWHAAZH00000007 | 5 | CH_sbr_216 | 5 | 5 | 0.0000000235121 |
| Solanum tuberosum | ST4.03ch01 | 5 | CH_stu_892 | 3 | 3 | 0.000717347 |
| Trochodendron aralioides | group18 | 5 | CH_tar_399 | 4 | 4 | 0.00000533327 |
| Trifolium pratense | Tp57577_TGAC_v2_scaf_365 | 5 | CH_tpr_54 | 7 | 7 | 0.000000000000314923 |
| Camellia sinensis var. sinensis | Chr2 | 6 | CH_camsi_516 | 5 | 6 | 0.000000129771 |
| Cardamine hirsuta | NSCAFB.163 | 6 | CH_chi_434 | 4 | 5 | 0.0000264717 |
| Lonicera japonica | GWHAAZE00000007 | 6 | CH_lonja_25 | 23 | 42 | 3.60093e-40 |
| Lactuca sativa | Lsat_1_v8_lg_5 | 6 | CH_lsa_636 | 5 | 16 | 0.0000923492 |
| Prunus persica | Pp02 | 6 | CH_ppe_394 | 6 | 18 | 0.000000920565 |
| Pisum sativum | chr5LG3 | 6 | CH_psa_198 | 5 | 6 | 0.0000000426091 |
| Quercus lobata | 6 | 6 | CH_qlo_1630 | 4 | 8 | 0.000401417 |
| Salix brachista | GWHAAZH00000007 | 6 | CH_sbr_216 | 5 | 5 | 0.0000000235121 |
| Solanum tuberosum | ST4.03ch01 | 6 | CH_stu_892 | 3 | 3 | 0.000717347 |
| Trochodendron aralioides | group18 | 6 | CH_tar_399 | 4 | 4 | 0.00000533327 |
| Trifolium pratense | Tp57577_TGAC_v2_scaf_365 | 6 | CH_tpr_54 | 7 | 7 | 0.000000000000314923 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |