Functional clusters
Information
- Type InterPro
- Description Invertase/pectin methylesterase inhibitor domain superfamily
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr1 | 5 | CH_acertr_55 | 7 | 7 | 0.0000000000000128623 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_7 | 5 | CH_amhyb_167 | 4 | 6 | 0.00000520705 |
| Arabidopsis thaliana | Chr3 | 5 | CH_ath_102 | 8 | 31 | 0.0000000000418865 |
| Arabidopsis thaliana | Chr5 | 5 | CH_ath_202 | 5 | 8 | 0.0000000634362 |
| Arabidopsis thaliana | Chr2 | 5 | CH_ath_533 | 3 | 3 | 0.000381819 |
| Brassica napus | A01 | 5 | CH_bna_250 | 7 | 13 | 0.000000000566571 |
| Brassica oleracea | C1 | 5 | CH_bol_254 | 6 | 14 | 0.000000114797 |
| Brassica rapa | A01 | 5 | CH_bra_172 | 6 | 13 | 0.000000223445 |
| Carica papaya | supercontig_49 | 5 | CH_cpa_168 | 4 | 4 | 0.000000459801 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1762 | 5 | CH_cqu_410 | 4 | 4 | 0.000000931836 |
| Daucus carota | DCARv2_Chr9 | 5 | CH_dca_101 | 6 | 6 | 0.000000000086752 |
| Daucus carota | DCARv2_Chr7 | 5 | CH_dca_726 | 6 | 47 | 0.000818613 |
| Davidia involucrata | GWHABJS00000010 | 5 | CH_din_702 | 3 | 3 | 0.000440781 |
| Erigeron canadensis | Conyza_canadensis_scaffold:5 | 5 | CH_eca_858 | 3 | 4 | 0.000814788 |
| Erythranthe guttata | scaffold_3 | 5 | CH_egut_296 | 5 | 6 | 0.000000185124 |
| Erythranthe guttata | scaffold_4 | 5 | CH_egut_404 | 4 | 4 | 0.00000772926 |
| Fragaria vesca | Fvb2 | 5 | CH_fve_741 | 3 | 3 | 0.000444156 |
| Fragaria vesca | Fvb4 | 5 | CH_fve_812 | 5 | 36 | 0.000822827 |
| Gossypium hirsutum | A05 | 5 | CH_ghi_13 | 21 | 22 | 7.49386e-46 |
| Gossypium hirsutum | D05 | 5 | CH_ghi_21 | 18 | 19 | 1.54627e-38 |
| Gossypium raimondii | Chr09 | 5 | CH_gra_6 | 22 | 23 | 7.71965e-49 |
| Helianthus annuus | HanXRQChr14 | 5 | CH_han_189 | 7 | 10 | 0.00000000000197579 |
| Helianthus annuus | HanXRQChr07 | 5 | CH_han_37 | 15 | 43 | 1.02587e-24 |
| Lupinus albus | Lalb_Chr19 | 5 | CH_lal_429 | 5 | 12 | 0.0000535017 |
| Lupinus albus | Lalb_Chr03 | 5 | CH_lal_68 | 9 | 17 | 0.000000000000595555 |
| Lonicera japonica | GWHAAZE00000002 | 5 | CH_lonja_569 | 7 | 64 | 0.00000221659 |
| Malus domestica | Chr04 | 5 | CH_mdo_661 | 4 | 5 | 0.00000390423 |
| Medicago truncatula | chr6 | 5 | CH_mtr_150 | 10 | 18 | 3.57243e-16 |
| Nicotiana tabacum | Nitab4.5_0000099 | 5 | CH_nta_237 | 3 | 3 | 0.000256287 |
| Oryza sativa ssp. japonica | chr08 | 5 | CH_osa_605 | 3 | 3 | 0.000200425 |
| Petunia axillaris | Peaxi162Scf00318 | 5 | CH_pax_88 | 7 | 12 | 0.000000000065428 |
| Pisum sativum | chr1LG6 | 5 | CH_psa_650 | 3 | 3 | 0.000463528 |
| Quercus lobata | 4 | 5 | CH_qlo_1204 | 8 | 77 | 0.0000500538 |
| Striga asiatica | scaffold298 | 5 | CH_sas_185 | 4 | 9 | 0.000203643 |
| Salix brachista | GWHAAZH00000013 | 5 | CH_sbr_154 | 6 | 7 | 0.000000000223221 |
| Trochodendron aralioides | group1 | 5 | CH_tar_454 | 4 | 7 | 0.0000305871 |
| Vanilla planifolia | CM028150.1 | 5 | CH_vpl_7 | 12 | 16 | 1.25412e-23 |
| Acer truncatum | chr1 | 6 | CH_acertr_55 | 7 | 7 | 0.0000000000000128623 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_7 | 6 | CH_amhyb_167 | 4 | 6 | 0.00000520705 |
| Arabidopsis thaliana | Chr3 | 6 | CH_ath_102 | 8 | 31 | 0.0000000000418865 |
| Arabidopsis thaliana | Chr5 | 6 | CH_ath_202 | 5 | 8 | 0.0000000634362 |
| Arabidopsis thaliana | Chr2 | 6 | CH_ath_533 | 3 | 3 | 0.000381819 |
| Brassica napus | A01 | 6 | CH_bna_250 | 7 | 13 | 0.000000000566571 |
| Brassica oleracea | C1 | 6 | CH_bol_254 | 6 | 14 | 0.000000114797 |
| Brassica rapa | A01 | 6 | CH_bra_172 | 6 | 13 | 0.000000223445 |
| Cucumis melo | chr11 | 6 | CH_cme_226 | 5 | 10 | 0.00000367319 |
| Cucumis melo | chr03 | 6 | CH_cme_23 | 13 | 22 | 5.60463e-22 |
| Carica papaya | supercontig_49 | 6 | CH_cpa_168 | 4 | 4 | 0.000000459801 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1762 | 6 | CH_cqu_410 | 4 | 4 | 0.000000931836 |
| Daucus carota | DCARv2_Chr9 | 6 | CH_dca_101 | 6 | 6 | 0.000000000086752 |
| Daucus carota | DCARv2_Chr7 | 6 | CH_dca_726 | 6 | 47 | 0.000818613 |
| Davidia involucrata | GWHABJS00000010 | 6 | CH_din_702 | 3 | 3 | 0.000440781 |
| Erigeron canadensis | Conyza_canadensis_scaffold:5 | 6 | CH_eca_858 | 3 | 4 | 0.000814788 |
| Erythranthe guttata | scaffold_3 | 6 | CH_egut_296 | 5 | 6 | 0.000000185124 |
| Erythranthe guttata | scaffold_4 | 6 | CH_egut_404 | 4 | 4 | 0.00000772926 |
| Fragaria x ananassa | Fvb7-2 | 6 | CH_fan_276 | 5 | 6 | 0.0000000276348 |
| Fragaria x ananassa | Fvb2-2 | 6 | CH_fan_629 | 4 | 5 | 0.0000109657 |
| Fragaria vesca | Fvb2 | 6 | CH_fve_741 | 3 | 3 | 0.000444156 |
| Fragaria vesca | Fvb4 | 6 | CH_fve_812 | 5 | 36 | 0.000822827 |
| Gossypium hirsutum | A05 | 6 | CH_ghi_13 | 21 | 22 | 7.49386e-46 |
| Gossypium hirsutum | D05 | 6 | CH_ghi_21 | 18 | 19 | 1.54627e-38 |
| Gossypium raimondii | Chr09 | 6 | CH_gra_6 | 22 | 23 | 7.71965e-49 |
| Helianthus annuus | HanXRQChr14 | 6 | CH_han_189 | 7 | 10 | 0.00000000000197579 |
| Helianthus annuus | HanXRQChr07 | 6 | CH_han_37 | 15 | 43 | 1.02587e-24 |
| Lupinus albus | Lalb_Chr19 | 6 | CH_lal_429 | 5 | 12 | 0.0000535017 |
| Lupinus albus | Lalb_Chr03 | 6 | CH_lal_68 | 9 | 17 | 0.000000000000595555 |
| Lonicera japonica | GWHAAZE00000002 | 6 | CH_lonja_569 | 7 | 64 | 0.00000221659 |
| Malus domestica | Chr04 | 6 | CH_mdo_661 | 4 | 5 | 0.00000390423 |
| Medicago truncatula | chr6 | 6 | CH_mtr_150 | 10 | 18 | 3.57243e-16 |
| Nicotiana tabacum | Nitab4.5_0000099 | 6 | CH_nta_237 | 3 | 3 | 0.000256287 |
| Oryza sativa ssp. japonica | chr08 | 6 | CH_osa_605 | 3 | 3 | 0.000200425 |
| Petunia axillaris | Peaxi162Scf00318 | 6 | CH_pax_88 | 7 | 12 | 0.000000000065428 |
| Pisum sativum | chr1LG6 | 6 | CH_psa_650 | 3 | 3 | 0.000463528 |
| Quercus lobata | 4 | 6 | CH_qlo_1204 | 8 | 77 | 0.0000500538 |
| Striga asiatica | scaffold298 | 6 | CH_sas_185 | 4 | 9 | 0.000203643 |
| Salix brachista | GWHAAZH00000013 | 6 | CH_sbr_154 | 6 | 7 | 0.000000000223221 |
| Trochodendron aralioides | group1 | 6 | CH_tar_454 | 4 | 7 | 0.0000305871 |
| Vanilla planifolia | CM028150.1 | 6 | CH_vpl_7 | 12 | 16 | 1.25412e-23 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |