Functional clusters

Information

  • Type InterPro
  • Description CENP-T/Histone H4, histone fold

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Citrullus lanatus CG_Chr11 5 CH_cla_352 2 2 0.000532269
Erigeron canadensis Conyza_canadensis_scaffold:3 5 CH_eca_162 5 23 0.00000000131291
Lactuca sativa Lsat_1_v8_lg_5 5 CH_lsa_148 5 5 0.00000000000344427
Medicago truncatula chr3 5 CH_mtr_705 5 80 0.00000152105
Populus trichocarpa Chr18 5 CH_ptr_438 3 4 0.00000440907
Populus trichocarpa Chr07 5 CH_ptr_637 3 11 0.000181589
Phaseolus vulgaris Chr11 5 CH_pvu_280 4 13 0.000000420141
Salix brachista GWHAAZH00000005 5 CH_sbr_323 3 6 0.0000023818
Solanum lycopersicum SL4.0ch06 5 CH_sly_340 4 14 0.000000299942
Solanum pennellii Spenn-ch06 5 CH_spe_277 4 13 0.0000000933006
Trifolium pratense Tp57577_TGAC_v2_LG6 5 CH_tpr_274 3 3 0.00000141825
Citrullus lanatus CG_Chr11 6 CH_cla_352 2 2 0.000532269
Erigeron canadensis Conyza_canadensis_scaffold:3 6 CH_eca_162 5 23 0.00000000131291
Fragaria x ananassa Fvb7-4 6 CH_fan_688 4 38 0.000020852
Lactuca sativa Lsat_1_v8_lg_5 6 CH_lsa_148 5 5 0.00000000000344427
Medicago truncatula chr3 6 CH_mtr_705 5 80 0.00000152105
Populus trichocarpa Chr18 6 CH_ptr_438 3 4 0.00000440907
Populus trichocarpa Chr07 6 CH_ptr_637 3 11 0.000181589
Phaseolus vulgaris Chr11 6 CH_pvu_280 4 13 0.000000420141
Salix brachista GWHAAZH00000005 6 CH_sbr_323 3 6 0.0000023818
Solanum lycopersicum SL4.0ch06 6 CH_sly_340 4 14 0.000000299942
Solanum pennellii Spenn-ch06 6 CH_spe_277 4 13 0.0000000933006
Trifolium pratense Tp57577_TGAC_v2_LG6 6 CH_tpr_274 3 3 0.00000141825

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001