Functional clusters

Information

  • Type InterPro
  • Description CID8-like protein, RNA recognition motif 1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amaranthus hybridus AmaHy_arrow1_Scaffold_4 5 CH_amhyb_294 2 2 0.000252525
Camellia sinensis var. sinensis Chr7 5 CH_camsi_1513 2 7 0.000962839
Capsicum annuum PGAv.1.6.scaffold303 5 CH_can_536 2 2 0.0000826105
Gossypium hirsutum D11 5 CH_ghi_670 4 29 0.00000523515
Lonicera japonica GWHAAZE00000003 5 CH_lonja_891 2 2 0.000179662
Medicago truncatula chr3 5 CH_mtr_1234 2 3 0.000369764
Phaseolus vulgaris Chr09 5 CH_pvu_521 2 2 0.000220418
Solanum lycopersicum SL4.0ch03 5 CH_sly_687 2 2 0.000176082
Solanum pennellii Spenn-ch03 5 CH_spe_629 2 2 0.000133437
Solanum tuberosum ST4.03ch03 5 CH_stu_684 2 2 0.000153736
Amaranthus hybridus AmaHy_arrow1_Scaffold_4 6 CH_amhyb_294 2 2 0.000252525
Camellia sinensis var. sinensis Chr7 6 CH_camsi_1513 2 7 0.000962839
Capsicum annuum PGAv.1.6.scaffold303 6 CH_can_536 2 2 0.0000826105
Gossypium hirsutum D11 6 CH_ghi_670 4 29 0.00000523515
Lonicera japonica GWHAAZE00000003 6 CH_lonja_891 2 2 0.000179662
Medicago truncatula chr3 6 CH_mtr_1234 2 3 0.000369764
Phaseolus vulgaris Chr09 6 CH_pvu_521 2 2 0.000220418
Solanum lycopersicum SL4.0ch03 6 CH_sly_687 2 2 0.000176082
Solanum pennellii Spenn-ch03 6 CH_spe_629 2 2 0.000133437
Solanum tuberosum ST4.03ch03 6 CH_stu_684 2 2 0.000153736

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001