Functional clusters

Information

  • Type InterPro
  • Description Protein NIM1-INTERACTING 2

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr11 5 CH_acertr_781 2 2 0.000211491
Avicennia marina ScioBoG_18778_HRSCAF_18863 5 CH_ama_7 5 5 0.000000000000104482
Aquilegia oxysepala CHR03 5 CH_aox_108 3 3 0.00000000964818
Camellia sinensis var. sinensis Chr10 5 CH_camsi_1291 2 3 0.000412677
Citrus clementina scaffold_4 5 CH_ccl_552 2 2 0.0000820311
Carya illinoinensis Chr16 5 CH_cil_687 2 2 0.000185948
Davidia involucrata GWHABJS00000018 5 CH_din_755 2 2 0.000500125
Erythranthe guttata scaffold_5 5 CH_egut_730 2 2 0.000728147
Fragaria vesca Fvb4 5 CH_fve_649 2 2 0.00017673
Lactuca sativa Lsat_1_v8_lg_4 5 CH_lsa_704 2 2 0.000154202
Olea europaea chr11 5 CH_oeu_551 2 2 0.000320273
Petunia axillaris Peaxi162Scf00382 5 CH_pax_77 4 4 0.0000000000156731
Quercus lobata 1 5 CH_qlo_1478 2 2 0.000154887
Rosa chinensis RcHm_v2.0_Chr4 5 CH_rch_1141 2 2 0.000119596
Rhododendron simsii chr09 5 CH_rsi_938 2 3 0.000580745
Solanum lycopersicum SL4.0ch03 5 CH_sly_823 2 2 0.000352164
Solanum pennellii Spenn-ch05 5 CH_spe_801 2 2 0.00044479
Solanum pennellii Spenn-ch03 5 CH_spe_802 2 2 0.00044479
Solanum tuberosum ST4.03ch03 5 CH_stu_870 2 2 0.000512453
Solanum tuberosum ST4.03ch05 5 CH_stu_871 2 2 0.000512453
Theobroma cacao Chromosome_2 5 CH_tca_629 2 2 0.000219716
Vaccinium macrocarpon chr8_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_622 2 2 0.000278772
Acer truncatum chr11 6 CH_acertr_781 2 2 0.000211491
Avicennia marina ScioBoG_18778_HRSCAF_18863 6 CH_ama_7 5 5 0.000000000000104482
Aquilegia oxysepala CHR03 6 CH_aox_108 3 3 0.00000000964818
Camellia sinensis var. sinensis Chr10 6 CH_camsi_1291 2 3 0.000412677
Citrus clementina scaffold_4 6 CH_ccl_552 2 2 0.0000820311
Carya illinoinensis Chr16 6 CH_cil_687 2 2 0.000185948
Davidia involucrata GWHABJS00000018 6 CH_din_755 2 2 0.000500125
Erythranthe guttata scaffold_5 6 CH_egut_730 2 2 0.000728147
Fragaria x ananassa Fvb4-4 6 CH_fan_1256 2 2 0.000832663
Fragaria vesca Fvb4 6 CH_fve_649 2 2 0.00017673
Lactuca sativa Lsat_1_v8_lg_4 6 CH_lsa_704 2 2 0.000154202
Olea europaea chr11 6 CH_oeu_551 2 2 0.000320273
Petunia axillaris Peaxi162Scf00382 6 CH_pax_77 4 4 0.0000000000156731
Quercus lobata 1 6 CH_qlo_1478 2 2 0.000154887
Rosa chinensis RcHm_v2.0_Chr4 6 CH_rch_1141 2 2 0.000119596
Rhododendron simsii chr09 6 CH_rsi_938 2 3 0.000580745
Solanum lycopersicum SL4.0ch03 6 CH_sly_823 2 2 0.000352164
Solanum pennellii Spenn-ch05 6 CH_spe_801 2 2 0.00044479
Solanum pennellii Spenn-ch03 6 CH_spe_802 2 2 0.00044479
Solanum tuberosum ST4.03ch03 6 CH_stu_870 2 2 0.000512453
Solanum tuberosum ST4.03ch05 6 CH_stu_871 2 2 0.000512453
Theobroma cacao Chromosome_2 6 CH_tca_629 2 2 0.000219716
Vaccinium macrocarpon chr8_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_622 2 2 0.000278772

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001