Functional clusters

Information

  • Type InterPro
  • Description Putative cell wall protein

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopoda AmTr_v1.0_scaffold00003 5 CH_atr_159 3 3 0.00000000946662
Daucus carota DCARv2_Chr2 5 CH_dca_545 2 2 0.000191333
Durio zibethinus NW_019167849.1 5 CH_dzi_601 2 4 0.000834215
Erythranthe guttata scaffold_8 5 CH_egut_227 3 3 0.00000000795325
Gossypium hirsutum A12 5 CH_ghi_1276 2 2 0.000747644
Gossypium hirsutum D12 5 CH_ghi_1277 2 2 0.000747644
Hydrangea macrophylla Hma1.2p1_0875F.1 5 CH_hma_448 2 2 0.000111086
Olea europaea chr16 5 CH_oeu_413 2 3 0.000160132
Rhododendron simsii chr06 5 CH_rsi_812 2 2 0.000193592
Amborella trichopoda AmTr_v1.0_scaffold00003 6 CH_atr_159 3 3 0.00000000946662
Daucus carota DCARv2_Chr2 6 CH_dca_545 2 2 0.000191333
Durio zibethinus NW_019167849.1 6 CH_dzi_601 2 4 0.000834215
Erythranthe guttata scaffold_8 6 CH_egut_227 3 3 0.00000000795325
Gossypium hirsutum A12 6 CH_ghi_1276 2 2 0.000747644
Gossypium hirsutum D12 6 CH_ghi_1277 2 2 0.000747644
Hydrangea macrophylla Hma1.2p1_0875F.1 6 CH_hma_448 2 2 0.000111086
Olea europaea chr16 6 CH_oeu_413 2 3 0.000160132
Rhododendron simsii chr06 6 CH_rsi_812 2 2 0.000193592

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001