Functional clusters

Information

  • Type InterPro
  • Description AtC3H46-like, RNA recognition motif

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr3 5 CH_acertr_971 2 2 0.00070497
Arabidopsis thaliana Chr1 5 CH_ath_601 2 2 0.000601633
Erigeron canadensis Conyza_canadensis_scaffold:1 5 CH_eca_803 2 2 0.000673083
Erythranthe guttata scaffold_4 5 CH_egut_713 2 2 0.000728147
Fragaria vesca Fvb3 5 CH_fve_820 2 2 0.000883652
Oryza sativa ssp. japonica chr03 5 CH_osa_743 2 2 0.000792184
Prunus persica Pp04 5 CH_ppe_826 2 2 0.000745962
Phaseolus vulgaris Chr11 5 CH_pvu_663 2 2 0.000734727
Rosa chinensis RcHm_v2.0_Chr5 5 CH_rch_1309 2 2 0.000398653
Vigna mungo CM024076.1 5 CH_vmu_583 2 2 0.000646141
Acer truncatum chr3 6 CH_acertr_971 2 2 0.00070497
Arabidopsis thaliana Chr1 6 CH_ath_601 2 2 0.000601633
Erigeron canadensis Conyza_canadensis_scaffold:1 6 CH_eca_803 2 2 0.000673083
Erythranthe guttata scaffold_4 6 CH_egut_713 2 2 0.000728147
Fragaria vesca Fvb3 6 CH_fve_820 2 2 0.000883652
Oryza sativa ssp. japonica chr03 6 CH_osa_743 2 2 0.000792184
Prunus persica Pp04 6 CH_ppe_826 2 2 0.000745962
Phaseolus vulgaris Chr11 6 CH_pvu_663 2 2 0.000734727
Rosa chinensis RcHm_v2.0_Chr5 6 CH_rch_1309 2 2 0.000398653
Vigna mungo CM024076.1 6 CH_vmu_583 2 2 0.000646141

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001