Functional clusters
Information
- Type InterPro
- Description Glutathione S-transferases Phi, C-terminal
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aethionema arabicum | LG-1 | 5 | CH_aar_186 | 3 | 3 | 0.00000149828 |
| Arabidopsis lyrata | scaffold_1 | 5 | CH_aly_142 | 4 | 4 | 0.000000000616864 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_15 | 5 | CH_amhyb_39 | 4 | 4 | 0.0000000000268422 |
| Aquilegia oxysepala | CHR06 | 5 | CH_aox_36 | 6 | 8 | 0.0000000000000566781 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.12 | 5 | CH_arhy_587 | 3 | 3 | 0.000000611736 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.02 | 5 | CH_arhy_588 | 3 | 3 | 0.000000611736 |
| Arabidopsis thaliana | Chr1 | 5 | CH_ath_132 | 4 | 7 | 0.000000000756436 |
| Brassica carinata | ChrC05 | 5 | CH_bca_1013 | 3 | 3 | 0.00000786879 |
| Brassica carinata | ChrB03 | 5 | CH_bca_351 | 4 | 4 | 0.0000000032801 |
| Brassica carinata | ChrB01 | 5 | CH_bca_601 | 4 | 8 | 0.000000229299 |
| Brassica napus | A10 | 5 | CH_bna_302 | 4 | 4 | 0.00000000214748 |
| Brassica napus | C05 | 5 | CH_bna_749 | 3 | 3 | 0.00000593295 |
| Brassica oleracea | C5 | 5 | CH_bol_349 | 3 | 3 | 0.00000155292 |
| Camellia sinensis var. sinensis | Chr2 | 5 | CH_camsi_783 | 3 | 6 | 0.00000756648 |
| Cannabis sativa | NC_044370.1 | 5 | CH_cansat_23 | 7 | 7 | 7.5791e-22 |
| Corylus avellana | 2 | 5 | CH_cav_92 | 5 | 8 | 0.000000000000812554 |
| Citrus clementina | scaffold_4 | 5 | CH_ccl_346 | 3 | 3 | 0.000000565268 |
| Citrus clementina | scaffold_3 | 5 | CH_ccl_347 | 3 | 3 | 0.000000565268 |
| Carya illinoinensis | Chr07 | 5 | CH_cil_104 | 6 | 12 | 0.00000000000000399216 |
| Citrullus lanatus | CG_Chr09 | 5 | CH_cla_84 | 3 | 3 | 0.0000000472204 |
| Carica papaya | supercontig_9 | 5 | CH_cpa_552 | 2 | 2 | 0.000570396 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2244 | 5 | CH_cqu_38 | 9 | 21 | 1.7735e-21 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1710 | 5 | CH_cqu_45 | 8 | 13 | 2.73574e-20 |
| Cucumis sativus L. | chr7 | 5 | CH_csa_159 | 3 | 3 | 0.0000000418111 |
| Davidia involucrata | GWHABJS00000007 | 5 | CH_din_270 | 3 | 3 | 0.000000300133 |
| Durio zibethinus | NW_019167893.1 | 5 | CH_dzi_255 | 3 | 5 | 0.00000112763 |
| Erigeron canadensis | Conyza_canadensis_scaffold:9 | 5 | CH_eca_677 | 2 | 2 | 0.000269233 |
| Eucalyptus grandis | Chr11 | 5 | CH_egr_125 | 8 | 8 | 5.60419e-23 |
| Eucalyptus grandis | Chr08 | 5 | CH_egr_182 | 8 | 16 | 7.19441e-19 |
| Erythranthe guttata | scaffold_4 | 5 | CH_egut_291 | 3 | 3 | 0.000000159065 |
| Helianthus annuus | HanXRQChr04 | 5 | CH_han_135 | 6 | 16 | 0.0000000000000266113 |
| Lotus japonicus | chr6 | 5 | CH_lja_102 | 4 | 5 | 0.00000000115167 |
| Lonicera japonica | GWHAAZE00000001 | 5 | CH_lonja_471 | 3 | 3 | 0.000000301275 |
| Magnolia biondii | Chr19 | 5 | CH_mbi_89 | 7 | 28 | 4.02987e-16 |
| Olea europaea | chr16 | 5 | CH_oeu_159 | 3 | 3 | 0.000000239348 |
| Petunia axillaris | Peaxi162Scf00399 | 5 | CH_pax_243 | 3 | 4 | 0.000000593943 |
| Punica granatum | NC_045132.1 | 5 | CH_pgr_263 | 3 | 3 | 0.00000070945 |
| Punica granatum | NC_045134.1 | 5 | CH_pgr_336 | 3 | 5 | 0.00000709158 |
| Prunus persica | Pp03 | 5 | CH_ppe_383 | 3 | 3 | 0.000000701166 |
| Pisum sativum | chr5LG3 | 5 | CH_psa_722 | 2 | 2 | 0.000782452 |
| Populus trichocarpa | Chr02 | 5 | CH_ptr_170 | 4 | 4 | 0.0000000000405549 |
| Phaseolus vulgaris | Chr08 | 5 | CH_pvu_323 | 3 | 3 | 0.00000178148 |
| Phaseolus vulgaris | Chr06 | 5 | CH_pvu_422 | 4 | 43 | 0.0000719275 |
| Quercus lobata | 12 | 5 | CH_qlo_32 | 12 | 15 | 1.34701e-36 |
| Rhododendron simsii | chr13 | 5 | CH_rsi_54 | 8 | 10 | 1.09034e-23 |
| Salix brachista | GWHAAZH00000002 | 5 | CH_sbr_135 | 5 | 12 | 0.0000000000432198 |
| Sechium edule | LG09 | 5 | CH_sed_156 | 3 | 3 | 0.000000152696 |
| Sequoiadendron giganteum | chr2 | 5 | CH_sgi_388 | 6 | 8 | 0.0000000000000511294 |
| Solanum lycopersicum | SL4.0ch06 | 5 | CH_sly_870 | 2 | 2 | 0.000586941 |
| Schrenkiella parvula | ch1-1 | 5 | CH_spa_143 | 3 | 3 | 0.000000781109 |
| Solanum pennellii | Spenn-ch06 | 5 | CH_spe_875 | 2 | 3 | 0.000800581 |
| Trochodendron aralioides | group16 | 5 | CH_tar_471 | 3 | 12 | 0.000041587 |
| Theobroma cacao | Chromosome_1 | 5 | CH_tca_183 | 4 | 4 | 0.000000000148511 |
| Tarenaya hassleriana | NW_010969548.1 | 5 | CH_tha_128 | 3 | 3 | 0.00000087818 |
| Tripterygium wilfordii | NC_052248.1 | 5 | CH_twi_39 | 5 | 5 | 0.00000000000000913072 |
| Vitis vinifera | chr7 | 5 | CH_vvi_163 | 4 | 4 | 0.000000000166365 |
| Aethionema arabicum | LG-1 | 6 | CH_aar_186 | 3 | 3 | 0.00000149828 |
| Arabidopsis lyrata | scaffold_1 | 6 | CH_aly_142 | 4 | 4 | 0.000000000616864 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_15 | 6 | CH_amhyb_39 | 4 | 4 | 0.0000000000268422 |
| Aquilegia oxysepala | CHR06 | 6 | CH_aox_36 | 6 | 8 | 0.0000000000000566781 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.12 | 6 | CH_arhy_587 | 3 | 3 | 0.000000611736 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.02 | 6 | CH_arhy_588 | 3 | 3 | 0.000000611736 |
| Arabidopsis thaliana | Chr1 | 6 | CH_ath_132 | 4 | 7 | 0.000000000756436 |
| Brassica carinata | ChrC05 | 6 | CH_bca_1013 | 3 | 3 | 0.00000786879 |
| Brassica carinata | ChrB03 | 6 | CH_bca_351 | 4 | 4 | 0.0000000032801 |
| Brassica carinata | ChrB01 | 6 | CH_bca_601 | 4 | 8 | 0.000000229299 |
| Brassica napus | A10 | 6 | CH_bna_302 | 4 | 4 | 0.00000000214748 |
| Brassica napus | C05 | 6 | CH_bna_749 | 3 | 3 | 0.00000593295 |
| Brassica oleracea | C5 | 6 | CH_bol_349 | 3 | 3 | 0.00000155292 |
| Camellia sinensis var. sinensis | Chr2 | 6 | CH_camsi_783 | 3 | 6 | 0.00000756648 |
| Cannabis sativa | NC_044370.1 | 6 | CH_cansat_23 | 7 | 7 | 7.5791e-22 |
| Corylus avellana | 2 | 6 | CH_cav_92 | 5 | 8 | 0.000000000000812554 |
| Citrus clementina | scaffold_4 | 6 | CH_ccl_346 | 3 | 3 | 0.000000565268 |
| Citrus clementina | scaffold_3 | 6 | CH_ccl_347 | 3 | 3 | 0.000000565268 |
| Carya illinoinensis | Chr07 | 6 | CH_cil_104 | 6 | 12 | 0.00000000000000399216 |
| Citrullus lanatus | CG_Chr09 | 6 | CH_cla_84 | 3 | 3 | 0.0000000472204 |
| Cucumis melo | chr01 | 6 | CH_cme_72 | 4 | 4 | 0.00000000000445379 |
| Carica papaya | supercontig_9 | 6 | CH_cpa_552 | 2 | 2 | 0.000570396 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2244 | 6 | CH_cqu_38 | 9 | 21 | 1.7735e-21 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1710 | 6 | CH_cqu_45 | 8 | 13 | 2.73574e-20 |
| Cucumis sativus L. | chr7 | 6 | CH_csa_159 | 3 | 3 | 0.0000000418111 |
| Davidia involucrata | GWHABJS00000007 | 6 | CH_din_270 | 3 | 3 | 0.000000300133 |
| Durio zibethinus | NW_019167893.1 | 6 | CH_dzi_255 | 3 | 5 | 0.00000112763 |
| Erigeron canadensis | Conyza_canadensis_scaffold:9 | 6 | CH_eca_677 | 2 | 2 | 0.000269233 |
| Eucalyptus grandis | Chr11 | 6 | CH_egr_125 | 8 | 8 | 5.60419e-23 |
| Eucalyptus grandis | Chr08 | 6 | CH_egr_182 | 8 | 16 | 7.19441e-19 |
| Erythranthe guttata | scaffold_4 | 6 | CH_egut_291 | 3 | 3 | 0.000000159065 |
| Helianthus annuus | HanXRQChr04 | 6 | CH_han_135 | 6 | 16 | 0.0000000000000266113 |
| Lotus japonicus | chr6 | 6 | CH_lja_102 | 4 | 5 | 0.00000000115167 |
| Lonicera japonica | GWHAAZE00000001 | 6 | CH_lonja_471 | 3 | 3 | 0.000000301275 |
| Magnolia biondii | Chr19 | 6 | CH_mbi_89 | 7 | 28 | 4.02987e-16 |
| Olea europaea | chr16 | 6 | CH_oeu_159 | 3 | 3 | 0.000000239348 |
| Petunia axillaris | Peaxi162Scf00399 | 6 | CH_pax_243 | 3 | 4 | 0.000000593943 |
| Punica granatum | NC_045132.1 | 6 | CH_pgr_263 | 3 | 3 | 0.00000070945 |
| Punica granatum | NC_045134.1 | 6 | CH_pgr_336 | 3 | 5 | 0.00000709158 |
| Prunus persica | Pp03 | 6 | CH_ppe_383 | 3 | 3 | 0.000000701166 |
| Pisum sativum | chr5LG3 | 6 | CH_psa_722 | 2 | 2 | 0.000782452 |
| Populus trichocarpa | Chr02 | 6 | CH_ptr_170 | 4 | 4 | 0.0000000000405549 |
| Phaseolus vulgaris | Chr08 | 6 | CH_pvu_323 | 3 | 3 | 0.00000178148 |
| Phaseolus vulgaris | Chr06 | 6 | CH_pvu_422 | 4 | 43 | 0.0000719275 |
| Quercus lobata | 12 | 6 | CH_qlo_32 | 12 | 15 | 1.34701e-36 |
| Rhododendron simsii | chr13 | 6 | CH_rsi_54 | 8 | 10 | 1.09034e-23 |
| Salix brachista | GWHAAZH00000002 | 6 | CH_sbr_135 | 5 | 12 | 0.0000000000432198 |
| Sechium edule | LG09 | 6 | CH_sed_156 | 3 | 3 | 0.000000152696 |
| Sequoiadendron giganteum | chr2 | 6 | CH_sgi_388 | 6 | 8 | 0.0000000000000511294 |
| Solanum lycopersicum | SL4.0ch06 | 6 | CH_sly_870 | 2 | 2 | 0.000586941 |
| Schrenkiella parvula | ch1-1 | 6 | CH_spa_143 | 3 | 3 | 0.000000781109 |
| Solanum pennellii | Spenn-ch06 | 6 | CH_spe_875 | 2 | 3 | 0.000800581 |
| Trochodendron aralioides | group16 | 6 | CH_tar_471 | 3 | 12 | 0.000041587 |
| Theobroma cacao | Chromosome_1 | 6 | CH_tca_183 | 4 | 4 | 0.000000000148511 |
| Tarenaya hassleriana | NW_010969548.1 | 6 | CH_tha_128 | 3 | 3 | 0.00000087818 |
| Tripterygium wilfordii | NC_052248.1 | 6 | CH_twi_39 | 5 | 5 | 0.00000000000000913072 |
| Vitis vinifera | chr7 | 6 | CH_vvi_163 | 4 | 4 | 0.000000000166365 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |