Functional clusters

Information

  • Type InterPro
  • Description Aquaporin transporter

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr12 5 CH_acertr_666 4 19 0.0000957019
Aquilegia oxysepala CHR04 5 CH_aox_312 3 4 0.0000780592
Amborella trichopoda AmTr_v1.0_scaffold00106 5 CH_atr_306 3 3 0.00000917316
Brassica carinata ChrC05 5 CH_bca_1493 3 3 0.000178302
Brassica carinata ChrC02 5 CH_bca_1494 3 3 0.000178302
Brassica carinata ChrC05 5 CH_bca_1977 3 4 0.000712549
Brassica carinata ChrC06 5 CH_bca_1978 3 4 0.000712549
Brassica carinata ChrB02 5 CH_bca_598 5 12 0.000000206363
Brassica napus A04 5 CH_bna_1126 3 3 0.000168221
Brassica napus A05 5 CH_bna_1446 3 6 0.000672301
Brassica napus C04 5 CH_bna_481 4 4 0.000000192035
Brassica oleracea C4 5 CH_bol_578 3 3 0.000080316
Brassica rapa A04 5 CH_bra_367 3 3 0.0000853079
Brassica rapa A05 5 CH_bra_494 3 5 0.000340922
Camellia sinensis var. sinensis Chr4 5 CH_camsi_1022 3 3 0.000125251
Camellia sinensis var. sinensis Chr10 5 CH_camsi_1023 3 3 0.000125251
Camellia sinensis var. sinensis Chr8 5 CH_camsi_131 7 9 0.0000000000000145529
Cannabis sativa NC_044379.1 5 CH_cansat_108 5 6 0.0000000000993036
Capsicum annuum PGAv.1.6.scaffold298 5 CH_can_124 6 6 0.000000000000332419
Capsicum annuum PGAv.1.6.scaffold888 5 CH_can_602 3 3 0.000101143
Cicer arietinum L. Ca_LG1_v3 5 CH_car_252 4 17 0.000136084
Corylus avellana 2 5 CH_cav_223 4 4 0.0000000627093
Chara braunii BFEA01000017 5 CH_cbr_47 4 7 0.000000000585976
Citrus clementina scaffold_6 5 CH_ccl_473 3 3 0.0000330682
Carpinus fangiana Cfa01 5 CH_cfa_436 3 3 0.0000987731
Cardamine hirsuta Chr3 5 CH_chi_441 3 3 0.0000355468
Carya illinoinensis Chr11 5 CH_cil_717 3 4 0.000284211
Citrullus lanatus CG_Chr04 5 CH_cla_257 3 4 0.000212049
Cucumis sativus L. chr6 5 CH_csa_105 5 6 0.000000000259321
Cucumis sativus L. chr5 5 CH_csa_303 3 3 0.0000381945
Daucus carota DCARv2_Chr1 5 CH_dca_445 3 3 0.0000650426
Durio zibethinus NW_019168470.1 5 CH_dzi_42 9 15 3.04641e-18
Eucalyptus grandis Chr04 5 CH_egr_1096 3 3 0.0000589882
Eucalyptus grandis Chr05 5 CH_egr_1097 3 3 0.0000589882
Eucalyptus grandis Chr05 5 CH_egr_690 4 4 0.0000000673263
Erythranthe guttata scaffold_8 5 CH_egut_246 4 4 0.0000000317435
Eutrema salsugineum scaffold_14 5 CH_esa_304 3 3 0.0000431447
Fragaria vesca Fvb6 5 CH_fve_125 6 10 0.00000000000449668
Gossypium hirsutum A10 5 CH_ghi_983 3 3 0.000162663
Gossypium hirsutum D10 5 CH_ghi_984 3 3 0.000162663
Gossypium raimondii Chr11 5 CH_gra_444 3 3 0.0000845009
Helianthus annuus HanXRQChr14 5 CH_han_1023 3 3 0.000263149
Helianthus annuus HanXRQChr13 5 CH_han_333 5 6 0.00000000440442
Helianthus annuus HanXRQChr07 5 CH_han_399 6 19 0.0000000321621
Helianthus annuus HanXRQChr15 5 CH_han_721 4 7 0.0000154201
Lotus japonicus chr4 5 CH_lja_385 3 3 0.0000647067
Lotus japonicus chr6 5 CH_lja_94 5 6 0.000000000590104
Lonicera japonica GWHAAZE00000009 5 CH_lonja_511 4 5 0.000000681926
Lonicera japonica GWHAAZE00000008 5 CH_lonja_676 4 10 0.0000284826
Lactuca sativa Lsat_1_v8_lg_6 5 CH_lsa_237 5 6 0.00000000186671
Lactuca sativa Lsat_1_v8_lg_2 5 CH_lsa_655 3 3 0.000142634
Magnolia biondii Chr05 5 CH_mbi_1054 3 4 0.00031248
Magnolia biondii Chr14 5 CH_mbi_532 5 19 0.00000124402
Magnolia biondii Chr04 5 CH_mbi_816 3 3 0.0000781916
Marchantia polymorpha scaffold_135 5 CH_mpo_60 4 4 0.0000000357922
Marchantia polymorpha scaffold_44 5 CH_mpo_61 4 4 0.0000000357922
Medicago truncatula chr2 5 CH_mtr_318 5 6 0.0000000000843368
Olea europaea chr19 5 CH_oeu_367 3 3 0.0000566058
Olea europaea chr6 5 CH_oeu_503 3 4 0.000226231
Oryza sativa ssp. japonica chr08 5 CH_osa_445 3 3 0.0000298724
Oryza sativa ssp. japonica chr07 5 CH_osa_622 3 6 0.000298318
Petunia axillaris Peaxi162Scf00413 5 CH_pax_186 4 4 0.0000000771274
Pisum sativum chr7LG7 5 CH_psa_509 3 4 0.000137633
Quercus lobata CM012294 5 CH_qlo_1165 3 3 0.0000285487
Quercus lobata 1 5 CH_qlo_1166 3 3 0.0000285487
Quercus lobata 8 5 CH_qlo_468 5 5 0.0000000000200924
Sechium edule LG14 5 CH_sed_191 4 5 0.000000497289
Sechium edule LG01 5 CH_sed_335 3 3 0.0000754316
Sequoiadendron giganteum chr8 5 CH_sgi_1115 5 8 0.00000017707
Sequoiadendron giganteum chr2 5 CH_sgi_1309 4 4 0.00000136009
Sequoiadendron giganteum chr10 5 CH_sgi_1310 4 4 0.00000136009
Sequoiadendron giganteum chr8 5 CH_sgi_1352 7 53 0.00000236876
Sequoiadendron giganteum chr2 5 CH_sgi_1430 4 5 0.00000678755
Solanum tuberosum ST4.03ch09 5 CH_stu_734 3 4 0.000155563
Trochodendron aralioides group13 5 CH_tar_249 4 4 0.0000000881358
Trochodendron aralioides group11 5 CH_tar_562 3 3 0.0000716071
Vaccinium macrocarpon chr12_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_406 3 3 0.0000847765
Acer truncatum chr12 6 CH_acertr_666 4 19 0.0000957019
Aquilegia oxysepala CHR04 6 CH_aox_312 3 4 0.0000780592
Amborella trichopoda AmTr_v1.0_scaffold00106 6 CH_atr_306 3 3 0.00000917316
Brassica carinata ChrC05 6 CH_bca_1493 3 3 0.000178302
Brassica carinata ChrC02 6 CH_bca_1494 3 3 0.000178302
Brassica carinata ChrC05 6 CH_bca_1977 3 4 0.000712549
Brassica carinata ChrC06 6 CH_bca_1978 3 4 0.000712549
Brassica carinata ChrB02 6 CH_bca_598 5 12 0.000000206363
Brassica napus A04 6 CH_bna_1126 3 3 0.000168221
Brassica napus A05 6 CH_bna_1446 3 6 0.000672301
Brassica napus C04 6 CH_bna_481 4 4 0.000000192035
Brassica oleracea C4 6 CH_bol_578 3 3 0.000080316
Brassica rapa A04 6 CH_bra_367 3 3 0.0000853079
Brassica rapa A05 6 CH_bra_494 3 5 0.000340922
Camellia sinensis var. sinensis Chr4 6 CH_camsi_1022 3 3 0.000125251
Camellia sinensis var. sinensis Chr10 6 CH_camsi_1023 3 3 0.000125251
Camellia sinensis var. sinensis Chr8 6 CH_camsi_131 7 9 0.0000000000000145529
Cannabis sativa NC_044379.1 6 CH_cansat_108 5 6 0.0000000000993036
Capsicum annuum PGAv.1.6.scaffold298 6 CH_can_124 6 6 0.000000000000332419
Capsicum annuum PGAv.1.6.scaffold888 6 CH_can_602 3 3 0.000101143
Cicer arietinum L. Ca_LG1_v3 6 CH_car_252 4 17 0.000136084
Corylus avellana 2 6 CH_cav_223 4 4 0.0000000627093
Chara braunii BFEA01000017 6 CH_cbr_47 4 7 0.000000000585976
Citrus clementina scaffold_6 6 CH_ccl_473 3 3 0.0000330682
Carpinus fangiana Cfa01 6 CH_cfa_436 3 3 0.0000987731
Cardamine hirsuta Chr3 6 CH_chi_441 3 3 0.0000355468
Carya illinoinensis Chr11 6 CH_cil_717 3 4 0.000284211
Citrullus lanatus CG_Chr04 6 CH_cla_257 3 4 0.000212049
Cucumis melo chr05 6 CH_cme_106 5 7 0.000000000739297
Cucumis melo chr10 6 CH_cme_276 3 3 0.0000364231
Cucumis sativus L. chr6 6 CH_csa_105 5 6 0.000000000259321
Cucumis sativus L. chr5 6 CH_csa_303 3 3 0.0000381945
Daucus carota DCARv2_Chr1 6 CH_dca_445 3 3 0.0000650426
Durio zibethinus NW_019168470.1 6 CH_dzi_42 9 15 3.04641e-18
Eucalyptus grandis Chr04 6 CH_egr_1096 3 3 0.0000589882
Eucalyptus grandis Chr05 6 CH_egr_1097 3 3 0.0000589882
Eucalyptus grandis Chr05 6 CH_egr_690 4 4 0.0000000673263
Erythranthe guttata scaffold_8 6 CH_egut_246 4 4 0.0000000317435
Eutrema salsugineum scaffold_14 6 CH_esa_304 3 3 0.0000431447
Fragaria x ananassa Fvb6-1 6 CH_fan_324 5 11 0.0000000986469
Fragaria x ananassa Fvb6-1 6 CH_fan_357 4 4 0.000000190239
Fragaria x ananassa Fvb7-1 6 CH_fan_590 4 7 0.00000664015
Fragaria x ananassa Fvb3-4 6 CH_fan_883 3 3 0.00016717
Fragaria x ananassa Fvb3-2 6 CH_fan_993 4 16 0.000342464
Fragaria vesca Fvb6 6 CH_fve_125 6 10 0.00000000000449668
Gossypium hirsutum A10 6 CH_ghi_983 3 3 0.000162663
Gossypium hirsutum D10 6 CH_ghi_984 3 3 0.000162663
Gossypium raimondii Chr11 6 CH_gra_444 3 3 0.0000845009
Helianthus annuus HanXRQChr14 6 CH_han_1023 3 3 0.000263149
Helianthus annuus HanXRQChr13 6 CH_han_333 5 6 0.00000000440442
Helianthus annuus HanXRQChr07 6 CH_han_399 6 19 0.0000000321621
Helianthus annuus HanXRQChr15 6 CH_han_721 4 7 0.0000154201
Lotus japonicus chr4 6 CH_lja_385 3 3 0.0000647067
Lotus japonicus chr6 6 CH_lja_94 5 6 0.000000000590104
Lonicera japonica GWHAAZE00000009 6 CH_lonja_511 4 5 0.000000681926
Lonicera japonica GWHAAZE00000008 6 CH_lonja_676 4 10 0.0000284826
Lactuca sativa Lsat_1_v8_lg_6 6 CH_lsa_237 5 6 0.00000000186671
Lactuca sativa Lsat_1_v8_lg_2 6 CH_lsa_655 3 3 0.000142634
Magnolia biondii Chr05 6 CH_mbi_1054 3 4 0.00031248
Magnolia biondii Chr14 6 CH_mbi_532 5 19 0.00000124402
Magnolia biondii Chr04 6 CH_mbi_816 3 3 0.0000781916
Marchantia polymorpha scaffold_135 6 CH_mpo_60 4 4 0.0000000357922
Marchantia polymorpha scaffold_44 6 CH_mpo_61 4 4 0.0000000357922
Medicago truncatula chr2 6 CH_mtr_318 5 6 0.0000000000843368
Olea europaea chr19 6 CH_oeu_367 3 3 0.0000566058
Olea europaea chr6 6 CH_oeu_503 3 4 0.000226231
Oryza sativa ssp. japonica chr08 6 CH_osa_445 3 3 0.0000298724
Oryza sativa ssp. japonica chr07 6 CH_osa_622 3 6 0.000298318
Petunia axillaris Peaxi162Scf00413 6 CH_pax_186 4 4 0.0000000771274
Pisum sativum chr7LG7 6 CH_psa_509 3 4 0.000137633
Quercus lobata CM012294 6 CH_qlo_1165 3 3 0.0000285487
Quercus lobata 1 6 CH_qlo_1166 3 3 0.0000285487
Quercus lobata 8 6 CH_qlo_468 5 5 0.0000000000200924
Sechium edule LG14 6 CH_sed_191 4 5 0.000000497289
Sechium edule LG01 6 CH_sed_335 3 3 0.0000754316
Sequoiadendron giganteum chr8 6 CH_sgi_1115 5 8 0.00000017707
Sequoiadendron giganteum chr2 6 CH_sgi_1309 4 4 0.00000136009
Sequoiadendron giganteum chr10 6 CH_sgi_1310 4 4 0.00000136009
Sequoiadendron giganteum chr8 6 CH_sgi_1352 7 53 0.00000236876
Sequoiadendron giganteum chr2 6 CH_sgi_1430 4 5 0.00000678755
Solanum tuberosum ST4.03ch09 6 CH_stu_734 3 4 0.000155563
Trochodendron aralioides group13 6 CH_tar_249 4 4 0.0000000881358
Trochodendron aralioides group11 6 CH_tar_562 3 3 0.0000716071
Vaccinium macrocarpon chr12_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_406 3 3 0.0000847765

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001