Functional clusters
Information
- Type InterPro
- Description Cell wall/vacuolar inhibitor of fructosidase
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr4 | 5 | CH_acertr_230 | 3 | 4 | 0.000000029819 |
| Arabidopsis lyrata | scaffold_3 | 5 | CH_aly_86 | 4 | 4 | 0.00000000000431373 |
| Avicennia marina | ScioBoG_4088_HRSCAF_4107 | 5 | CH_ama_171 | 2 | 2 | 0.000258665 |
| Brassica carinata | ChrB04 | 5 | CH_bca_103 | 5 | 6 | 0.0000000000000282158 |
| Camellia sinensis var. sinensis | Chr5 | 5 | CH_camsi_1093 | 2 | 2 | 0.000137564 |
| Cicer arietinum L. | Ca_LG7_v3 | 5 | CH_car_18 | 5 | 18 | 0.00000000000235729 |
| Corylus avellana | 1 | 5 | CH_cav_135 | 4 | 7 | 0.000000000236585 |
| Coffea canephora | chr3 | 5 | CH_ccan_458 | 2 | 7 | 0.0000894361 |
| Citrus clementina | scaffold_9 | 5 | CH_ccl_276 | 3 | 3 | 0.0000000403763 |
| Carpinus fangiana | Cfa06 | 5 | CH_cfa_420 | 2 | 2 | 0.0000757346 |
| Cardamine hirsuta | Chr3 | 5 | CH_chi_74 | 5 | 5 | 0.00000000000000359581 |
| Carya illinoinensis | Chr01 | 5 | CH_cil_160 | 4 | 5 | 0.00000000000357217 |
| Carica papaya | supercontig_9 | 5 | CH_cpa_114 | 3 | 4 | 0.0000000542253 |
| Capsella rubella | scaffold_3 | 5 | CH_cru_239 | 3 | 4 | 0.000000128297 |
| Durio zibethinus | NW_019167849.1 | 5 | CH_dzi_189 | 3 | 3 | 0.000000112784 |
| Durio zibethinus | NW_019167904.1 | 5 | CH_dzi_190 | 3 | 3 | 0.000000112784 |
| Eucalyptus grandis | Chr08 | 5 | CH_egr_594 | 3 | 3 | 0.00000000513834 |
| Eutrema salsugineum | scaffold_13 | 5 | CH_esa_91 | 4 | 5 | 0.0000000000331199 |
| Glycine max | Gm17 | 5 | CH_gma_284 | 4 | 9 | 0.0000000206734 |
| Glycine max | Gm20 | 5 | CH_gma_65 | 6 | 10 | 0.00000000000000111729 |
| Gossypium raimondii | Chr11 | 5 | CH_gra_632 | 2 | 2 | 0.000536107 |
| Gossypium raimondii | Chr02 | 5 | CH_gra_633 | 2 | 2 | 0.000536107 |
| Helianthus annuus | HanXRQChr13 | 5 | CH_han_217 | 4 | 6 | 0.0000000000129833 |
| Hydrangea macrophylla | Hma1.2p1_0078F.1 | 5 | CH_hma_446 | 2 | 2 | 0.000111086 |
| Lupinus albus | Lalb_Chr07 | 5 | CH_lal_209 | 3 | 3 | 0.000000231376 |
| Lotus japonicus | chr4 | 5 | CH_lja_209 | 3 | 3 | 0.000000268461 |
| Lonicera japonica | GWHAAZE00000003 | 5 | CH_lonja_771 | 2 | 2 | 0.0000598874 |
| Lactuca sativa | Lsat_1_v8_lg_7 | 5 | CH_lsa_338 | 3 | 3 | 0.0000000792629 |
| Malus domestica | Chr13 | 5 | CH_mdo_145 | 5 | 8 | 0.000000000000401161 |
| Malus domestica | Chr03 | 5 | CH_mdo_426 | 4 | 14 | 0.0000000539753 |
| Manihot esculenta | Chromosome03 | 5 | CH_mes_726 | 2 | 2 | 0.000915947 |
| Manihot esculenta | Chromosome15 | 5 | CH_mes_727 | 2 | 2 | 0.000915947 |
| Medicago truncatula | chr4 | 5 | CH_mtr_86 | 8 | 22 | 9.84583e-21 |
| Medicago truncatula | chr2 | 5 | CH_mtr_888 | 3 | 8 | 0.0000311716 |
| Nicotiana tabacum | Nitab4.5_0002150 | 5 | CH_nta_279 | 2 | 2 | 0.000329182 |
| Punica granatum | NC_045127.1 | 5 | CH_pgr_272 | 3 | 5 | 0.000000844425 |
| Phaseolus vulgaris | Chr03 | 5 | CH_pvu_65 | 6 | 10 | 7.08224e-17 |
| Quercus lobata | 6 | 5 | CH_qlo_369 | 4 | 4 | 0.000000000000412889 |
| Salix brachista | GWHAAZH00000010 | 5 | CH_sbr_669 | 2 | 2 | 0.00063014 |
| Salix brachista | GWHAAZH00000008 | 5 | CH_sbr_670 | 2 | 2 | 0.00063014 |
| Solanum lycopersicum | SL4.0ch12 | 5 | CH_sly_231 | 3 | 3 | 0.00000000516764 |
| Solanum pennellii | Spenn-ch12 | 5 | CH_spe_565 | 2 | 2 | 0.000044479 |
| Solanum tuberosum | ST4.03ch12 | 5 | CH_stu_254 | 3 | 3 | 0.00000000393922 |
| Tarenaya hassleriana | NW_010966178.1 | 5 | CH_tha_262 | 2 | 2 | 0.000209541 |
| Trifolium pratense | Tp57577_TGAC_v2_LG4 | 5 | CH_tpr_23 | 7 | 16 | 6.09963e-18 |
| Vigna mungo | CM024074.1 | 5 | CH_vmu_164 | 3 | 4 | 0.000000100197 |
| Acer truncatum | chr4 | 6 | CH_acertr_230 | 3 | 4 | 0.000000029819 |
| Arabidopsis lyrata | scaffold_3 | 6 | CH_aly_86 | 4 | 4 | 0.00000000000431373 |
| Avicennia marina | ScioBoG_4088_HRSCAF_4107 | 6 | CH_ama_171 | 2 | 2 | 0.000258665 |
| Brassica carinata | ChrB04 | 6 | CH_bca_103 | 5 | 6 | 0.0000000000000282158 |
| Camellia sinensis var. sinensis | Chr5 | 6 | CH_camsi_1093 | 2 | 2 | 0.000137564 |
| Cicer arietinum L. | Ca_LG7_v3 | 6 | CH_car_18 | 5 | 18 | 0.00000000000235729 |
| Corylus avellana | 1 | 6 | CH_cav_135 | 4 | 7 | 0.000000000236585 |
| Coffea canephora | chr3 | 6 | CH_ccan_458 | 2 | 7 | 0.0000894361 |
| Citrus clementina | scaffold_9 | 6 | CH_ccl_276 | 3 | 3 | 0.0000000403763 |
| Carpinus fangiana | Cfa06 | 6 | CH_cfa_420 | 2 | 2 | 0.0000757346 |
| Cardamine hirsuta | Chr3 | 6 | CH_chi_74 | 5 | 5 | 0.00000000000000359581 |
| Carya illinoinensis | Chr01 | 6 | CH_cil_160 | 4 | 5 | 0.00000000000357217 |
| Carica papaya | supercontig_9 | 6 | CH_cpa_114 | 3 | 4 | 0.0000000542253 |
| Capsella rubella | scaffold_3 | 6 | CH_cru_239 | 3 | 4 | 0.000000128297 |
| Durio zibethinus | NW_019167849.1 | 6 | CH_dzi_189 | 3 | 3 | 0.000000112784 |
| Durio zibethinus | NW_019167904.1 | 6 | CH_dzi_190 | 3 | 3 | 0.000000112784 |
| Eucalyptus grandis | Chr08 | 6 | CH_egr_594 | 3 | 3 | 0.00000000513834 |
| Eutrema salsugineum | scaffold_13 | 6 | CH_esa_91 | 4 | 5 | 0.0000000000331199 |
| Fragaria x ananassa | Fvb4-4 | 6 | CH_fan_131 | 5 | 16 | 0.0000000000115222 |
| Fragaria x ananassa | Fvb4-3 | 6 | CH_fan_944 | 3 | 20 | 0.000265975 |
| Glycine max | Gm17 | 6 | CH_gma_284 | 4 | 9 | 0.0000000206734 |
| Glycine max | Gm20 | 6 | CH_gma_65 | 6 | 10 | 0.00000000000000111729 |
| Gossypium raimondii | Chr11 | 6 | CH_gra_632 | 2 | 2 | 0.000536107 |
| Gossypium raimondii | Chr02 | 6 | CH_gra_633 | 2 | 2 | 0.000536107 |
| Helianthus annuus | HanXRQChr13 | 6 | CH_han_217 | 4 | 6 | 0.0000000000129833 |
| Hydrangea macrophylla | Hma1.2p1_0078F.1 | 6 | CH_hma_446 | 2 | 2 | 0.000111086 |
| Lupinus albus | Lalb_Chr07 | 6 | CH_lal_209 | 3 | 3 | 0.000000231376 |
| Lotus japonicus | chr4 | 6 | CH_lja_209 | 3 | 3 | 0.000000268461 |
| Lonicera japonica | GWHAAZE00000003 | 6 | CH_lonja_771 | 2 | 2 | 0.0000598874 |
| Lactuca sativa | Lsat_1_v8_lg_7 | 6 | CH_lsa_338 | 3 | 3 | 0.0000000792629 |
| Malus domestica | Chr13 | 6 | CH_mdo_145 | 5 | 8 | 0.000000000000401161 |
| Malus domestica | Chr03 | 6 | CH_mdo_426 | 4 | 14 | 0.0000000539753 |
| Manihot esculenta | Chromosome03 | 6 | CH_mes_726 | 2 | 2 | 0.000915947 |
| Manihot esculenta | Chromosome15 | 6 | CH_mes_727 | 2 | 2 | 0.000915947 |
| Medicago truncatula | chr4 | 6 | CH_mtr_86 | 8 | 22 | 9.84583e-21 |
| Medicago truncatula | chr2 | 6 | CH_mtr_888 | 3 | 8 | 0.0000311716 |
| Nicotiana tabacum | Nitab4.5_0002150 | 6 | CH_nta_279 | 2 | 2 | 0.000329182 |
| Punica granatum | NC_045127.1 | 6 | CH_pgr_272 | 3 | 5 | 0.000000844425 |
| Phaseolus vulgaris | Chr03 | 6 | CH_pvu_65 | 6 | 10 | 7.08224e-17 |
| Quercus lobata | 6 | 6 | CH_qlo_369 | 4 | 4 | 0.000000000000412889 |
| Salix brachista | GWHAAZH00000010 | 6 | CH_sbr_669 | 2 | 2 | 0.00063014 |
| Salix brachista | GWHAAZH00000008 | 6 | CH_sbr_670 | 2 | 2 | 0.00063014 |
| Solanum lycopersicum | SL4.0ch12 | 6 | CH_sly_231 | 3 | 3 | 0.00000000516764 |
| Solanum pennellii | Spenn-ch12 | 6 | CH_spe_565 | 2 | 2 | 0.000044479 |
| Solanum tuberosum | ST4.03ch12 | 6 | CH_stu_254 | 3 | 3 | 0.00000000393922 |
| Tarenaya hassleriana | NW_010966178.1 | 6 | CH_tha_262 | 2 | 2 | 0.000209541 |
| Trifolium pratense | Tp57577_TGAC_v2_LG4 | 6 | CH_tpr_23 | 7 | 16 | 6.09963e-18 |
| Vigna mungo | CM024074.1 | 6 | CH_vmu_164 | 3 | 4 | 0.000000100197 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |