Functional clusters
Information
- Type InterPro
- Description RuBisCO
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Beta vulgaris | Chr4_EL10_PGA_scaffold1 | 5 | CH_bvu_262 | 3 | 3 | 0.00000467837 |
| Erythranthe guttata | scaffold_4 | 5 | CH_egut_603 | 2 | 2 | 0.000218444 |
| Lupinus albus | Lalb_Chr13 | 5 | CH_lal_231 | 4 | 14 | 0.00000043355 |
| Lupinus albus | Lalb_Chr07 | 5 | CH_lal_273 | 3 | 3 | 0.00000150394 |
| Malus domestica | Chr11 | 5 | CH_mdo_998 | 2 | 2 | 0.000113763 |
| Nelumbo nucifera | scaffold010 | 5 | CH_nnu_512 | 2 | 18 | 0.00028901 |
| Olea europaea | chr1 | 5 | CH_oeu_179 | 4 | 24 | 0.00000060932 |
| Solanum lycopersicum | SL4.0ch12 | 5 | CH_sly_336 | 3 | 3 | 0.000000289388 |
| Beta vulgaris | Chr4_EL10_PGA_scaffold1 | 6 | CH_bvu_262 | 3 | 3 | 0.00000467837 |
| Erythranthe guttata | scaffold_4 | 6 | CH_egut_603 | 2 | 2 | 0.000218444 |
| Lupinus albus | Lalb_Chr13 | 6 | CH_lal_231 | 4 | 14 | 0.00000043355 |
| Lupinus albus | Lalb_Chr07 | 6 | CH_lal_273 | 3 | 3 | 0.00000150394 |
| Malus domestica | Chr11 | 6 | CH_mdo_998 | 2 | 2 | 0.000113763 |
| Nelumbo nucifera | scaffold010 | 6 | CH_nnu_512 | 2 | 18 | 0.00028901 |
| Olea europaea | chr1 | 6 | CH_oeu_179 | 4 | 24 | 0.00000060932 |
| Solanum lycopersicum | SL4.0ch12 | 6 | CH_sly_336 | 3 | 3 | 0.000000289388 |
Available child term results
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |