Functional clusters

Information

  • Type InterPro
  • Description Xylanase inhibitor I-like

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-1 5 CH_aar_291 2 2 0.0000912326
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.16 5 CH_arhy_1073 2 3 0.000269438
Arabidopsis thaliana Chr1 5 CH_ath_521 2 2 0.000286492
Arabidopsis thaliana Chr5 5 CH_ath_522 2 2 0.000286492
Amborella trichopoda AmTr_v1.0_scaffold00025 5 CH_atr_405 2 2 0.0000794407
Brassica carinata ChrC07 5 CH_bca_2009 2 4 0.000769513
Brassica napus A08 5 CH_bna_1154 2 2 0.000185617
Cicer arietinum L. Ca_LG4_v3 5 CH_car_304 2 2 0.00023349
Corylus avellana 2 5 CH_cav_652 2 2 0.000230008
Citrus clementina scaffold_9 5 CH_ccl_20 12 23 4.65927e-33
Carya illinoinensis Chr07 5 CH_cil_686 2 2 0.000185948
Corchorus olitorius AWUE01014120.1 5 CH_col_59 3 3 0.000000128001
Carica papaya supercontig_52 5 CH_cpa_507 2 2 0.000285198
Cucumis sativus L. chr3 5 CH_csa_140 3 3 0.0000000104528
Daucus carota DCARv2_Chr3 5 CH_dca_293 3 3 0.00000277621
Daucus carota DCARv2_Chr1 5 CH_dca_72 5 6 0.00000000000223559
Eucalyptus grandis Chr11 5 CH_egr_1415 2 2 0.000877912
Lupinus albus Lalb_Chr02 5 CH_lal_712 2 2 0.000524824
Lotus japonicus chr5 5 CH_lja_610 2 2 0.000715077
Medicago truncatula chr1 5 CH_mtr_634 3 5 0.000000506369
Nelumbo nucifera chr4 5 CH_nnu_566 2 2 0.000481684
Oryza sativa ssp. japonica chr01 5 CH_osa_41 7 15 7.03507e-19
Punica granatum NC_045134.1 5 CH_pgr_310 3 15 0.00000384113
Pisum sativum chr6LG2 5 CH_psa_770 2 3 0.000938886
Populus trichocarpa Chr19 5 CH_ptr_127 5 6 0.000000000000397779
Quercus lobata 12 5 CH_qlo_1849 2 3 0.000929264
Rosa chinensis RcHm_v2.0_Chr6 5 CH_rch_1252 2 2 0.000239192
Schrenkiella parvula ch1-1 5 CH_spa_295 2 2 0.000236202
Tarenaya hassleriana NW_010969548.1 5 CH_tha_261 2 2 0.000209541
Tripterygium wilfordii NC_052232.1 5 CH_twi_179 3 3 0.000000163182
Aethionema arabicum LG-1 6 CH_aar_291 2 2 0.0000912326
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.16 6 CH_arhy_1073 2 3 0.000269438
Arabidopsis thaliana Chr1 6 CH_ath_521 2 2 0.000286492
Arabidopsis thaliana Chr5 6 CH_ath_522 2 2 0.000286492
Amborella trichopoda AmTr_v1.0_scaffold00025 6 CH_atr_405 2 2 0.0000794407
Brassica carinata ChrC07 6 CH_bca_2009 2 4 0.000769513
Brassica napus A08 6 CH_bna_1154 2 2 0.000185617
Cicer arietinum L. Ca_LG4_v3 6 CH_car_304 2 2 0.00023349
Corylus avellana 2 6 CH_cav_652 2 2 0.000230008
Citrus clementina scaffold_9 6 CH_ccl_20 12 23 4.65927e-33
Carya illinoinensis Chr07 6 CH_cil_686 2 2 0.000185948
Corchorus olitorius AWUE01014120.1 6 CH_col_59 3 3 0.000000128001
Carica papaya supercontig_52 6 CH_cpa_507 2 2 0.000285198
Cucumis sativus L. chr3 6 CH_csa_140 3 3 0.0000000104528
Daucus carota DCARv2_Chr3 6 CH_dca_293 3 3 0.00000277621
Daucus carota DCARv2_Chr1 6 CH_dca_72 5 6 0.00000000000223559
Eucalyptus grandis Chr11 6 CH_egr_1415 2 2 0.000877912
Lupinus albus Lalb_Chr02 6 CH_lal_712 2 2 0.000524824
Lotus japonicus chr5 6 CH_lja_610 2 2 0.000715077
Medicago truncatula chr1 6 CH_mtr_634 3 5 0.000000506369
Nelumbo nucifera chr4 6 CH_nnu_566 2 2 0.000481684
Oryza sativa ssp. japonica chr01 6 CH_osa_41 7 15 7.03507e-19
Punica granatum NC_045134.1 6 CH_pgr_310 3 15 0.00000384113
Pisum sativum chr6LG2 6 CH_psa_770 2 3 0.000938886
Populus trichocarpa Chr19 6 CH_ptr_127 5 6 0.000000000000397779
Quercus lobata 12 6 CH_qlo_1849 2 3 0.000929264
Rosa chinensis RcHm_v2.0_Chr6 6 CH_rch_1252 2 2 0.000239192
Schrenkiella parvula ch1-1 6 CH_spa_295 2 2 0.000236202
Tarenaya hassleriana NW_010969548.1 6 CH_tha_261 2 2 0.000209541
Tripterygium wilfordii NC_052232.1 6 CH_twi_179 3 3 0.000000163182

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001