Functional clusters
Information
- Type InterPro
- Description Peptidase M10A, catalytic domain
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr10 | 5 | CH_acertr_305 | 4 | 10 | 0.000000157562 |
| Acer truncatum | chr12 | 5 | CH_acertr_70 | 5 | 5 | 0.000000000000238459 |
| Aquilegia oxysepala | CHR03 | 5 | CH_aox_63 | 5 | 9 | 0.0000000000309356 |
| Aquilegia oxysepala | CHR03 | 5 | CH_aox_88 | 4 | 4 | 0.000000000766097 |
| Camellia sinensis var. sinensis | Chr14 | 5 | CH_camsi_1534 | 2 | 2 | 0.000962949 |
| Corylus avellana | 9 | 5 | CH_cav_124 | 4 | 5 | 0.000000000101404 |
| Carya illinoinensis | Chr02 | 5 | CH_cil_38 | 8 | 8 | 3.32697e-24 |
| Citrullus lanatus | CG_Chr09 | 5 | CH_cla_123 | 3 | 3 | 0.000000661086 |
| Daucus carota | DCARv2_Chr9 | 5 | CH_dca_142 | 4 | 5 | 0.00000000389445 |
| Daucus carota | DCARv2_Chr2 | 5 | CH_dca_335 | 3 | 4 | 0.00000888125 |
| Davidia involucrata | GWHABJS00000012 | 5 | CH_din_140 | 4 | 4 | 0.000000000047289 |
| Durio zibethinus | NW_019168470.1 | 5 | CH_dzi_281 | 3 | 4 | 0.0000028352 |
| Eucalyptus grandis | Chr11 | 5 | CH_egr_330 | 5 | 6 | 0.0000000000000665338 |
| Erythranthe guttata | scaffold_11 | 5 | CH_egut_139 | 5 | 5 | 0.00000000000709583 |
| Erythranthe guttata | scaffold_4 | 5 | CH_egut_234 | 4 | 4 | 0.0000000102568 |
| Erythranthe guttata | scaffold_12 | 5 | CH_egut_235 | 4 | 4 | 0.0000000102568 |
| Fragaria vesca | Fvb6 | 5 | CH_fve_190 | 4 | 5 | 0.000000000386373 |
| Helianthus annuus | HanXRQChr13 | 5 | CH_han_384 | 5 | 30 | 0.0000000203057 |
| Lactuca sativa | Lsat_1_v8_lg_3 | 5 | CH_lsa_325 | 5 | 50 | 0.0000000508993 |
| Magnolia biondii | Chr17 | 5 | CH_mbi_275 | 5 | 55 | 0.00000000303879 |
| Malus domestica | Chr09 | 5 | CH_mdo_551 | 3 | 3 | 0.00000061692 |
| Manihot esculenta | Chromosome15 | 5 | CH_mes_137 | 6 | 12 | 0.000000000000682701 |
| Manihot esculenta | Chromosome07 | 5 | CH_mes_234 | 4 | 4 | 0.00000000330972 |
| Nelumbo nucifera | chr3 | 5 | CH_nnu_85 | 4 | 4 | 0.0000000000422484 |
| Oryza sativa ssp. japonica | chr10 | 5 | CH_osa_230 | 3 | 3 | 0.0000000418381 |
| Petunia axillaris | Peaxi162Scf00174 | 5 | CH_pax_609 | 2 | 2 | 0.000422134 |
| Punica granatum | NC_045134.1 | 5 | CH_pgr_368 | 3 | 5 | 0.00001857 |
| Prunus persica | Pp02 | 5 | CH_ppe_507 | 3 | 4 | 0.0000151863 |
| Papaver somniferum | NW_020620381.1 | 5 | CH_pso_773 | 3 | 4 | 0.000019927 |
| Populus trichocarpa | Chr08 | 5 | CH_ptr_135 | 5 | 6 | 0.00000000000150814 |
| Populus trichocarpa | Chr19 | 5 | CH_ptr_413 | 3 | 3 | 0.0000022802 |
| Quercus lobata | 6 | 5 | CH_qlo_68 | 10 | 13 | 2.31248e-28 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 5 | CH_rch_269 | 5 | 11 | 0.00000000000404077 |
| Salvia bowleyana | GWHASIU00000004 | 5 | CH_sbo_92 | 6 | 7 | 9.22184e-17 |
| Salix brachista | GWHAAZH00000008 | 5 | CH_sbr_159 | 4 | 4 | 0.000000000371602 |
| Salix brachista | GWHAAZH00000019 | 5 | CH_sbr_304 | 3 | 3 | 0.00000131039 |
| Solanum lycopersicum | SL4.0ch04 | 5 | CH_sly_869 | 2 | 2 | 0.000586941 |
| Solanum pennellii | Spenn-ch04 | 5 | CH_spe_698 | 2 | 2 | 0.000266874 |
| Solanum tuberosum | ST4.03ch00 | 5 | CH_stu_896 | 2 | 2 | 0.000768679 |
| Selenicereus undatus | Scaffold_3410 | 5 | CH_sun_166 | 2 | 2 | 0.0000726639 |
| Trochodendron aralioides | group13 | 5 | CH_tar_364 | 3 | 3 | 0.00000196806 |
| Tripterygium wilfordii | NC_052242.1 | 5 | CH_twi_11 | 12 | 32 | 1.07243e-28 |
| Vigna mungo | CM024077.1 | 5 | CH_vmu_178 | 3 | 3 | 0.000000219194 |
| Acer truncatum | chr10 | 6 | CH_acertr_305 | 4 | 10 | 0.000000157562 |
| Acer truncatum | chr12 | 6 | CH_acertr_70 | 5 | 5 | 0.000000000000238459 |
| Aquilegia oxysepala | CHR03 | 6 | CH_aox_63 | 5 | 9 | 0.0000000000309356 |
| Aquilegia oxysepala | CHR03 | 6 | CH_aox_88 | 4 | 4 | 0.000000000766097 |
| Camellia sinensis var. sinensis | Chr14 | 6 | CH_camsi_1534 | 2 | 2 | 0.000962949 |
| Corylus avellana | 9 | 6 | CH_cav_124 | 4 | 5 | 0.000000000101404 |
| Carya illinoinensis | Chr02 | 6 | CH_cil_38 | 8 | 8 | 3.32697e-24 |
| Citrullus lanatus | CG_Chr09 | 6 | CH_cla_123 | 3 | 3 | 0.000000661086 |
| Daucus carota | DCARv2_Chr9 | 6 | CH_dca_142 | 4 | 5 | 0.00000000389445 |
| Daucus carota | DCARv2_Chr2 | 6 | CH_dca_335 | 3 | 4 | 0.00000888125 |
| Davidia involucrata | GWHABJS00000012 | 6 | CH_din_140 | 4 | 4 | 0.000000000047289 |
| Durio zibethinus | NW_019168470.1 | 6 | CH_dzi_281 | 3 | 4 | 0.0000028352 |
| Eucalyptus grandis | Chr11 | 6 | CH_egr_330 | 5 | 6 | 0.0000000000000665338 |
| Erythranthe guttata | scaffold_11 | 6 | CH_egut_139 | 5 | 5 | 0.00000000000709583 |
| Erythranthe guttata | scaffold_4 | 6 | CH_egut_234 | 4 | 4 | 0.0000000102568 |
| Erythranthe guttata | scaffold_12 | 6 | CH_egut_235 | 4 | 4 | 0.0000000102568 |
| Fragaria vesca | Fvb6 | 6 | CH_fve_190 | 4 | 5 | 0.000000000386373 |
| Helianthus annuus | HanXRQChr13 | 6 | CH_han_384 | 5 | 30 | 0.0000000203057 |
| Lactuca sativa | Lsat_1_v8_lg_3 | 6 | CH_lsa_325 | 5 | 50 | 0.0000000508993 |
| Magnolia biondii | Chr17 | 6 | CH_mbi_275 | 5 | 55 | 0.00000000303879 |
| Malus domestica | Chr09 | 6 | CH_mdo_551 | 3 | 3 | 0.00000061692 |
| Manihot esculenta | Chromosome15 | 6 | CH_mes_137 | 6 | 12 | 0.000000000000682701 |
| Manihot esculenta | Chromosome07 | 6 | CH_mes_234 | 4 | 4 | 0.00000000330972 |
| Nelumbo nucifera | chr3 | 6 | CH_nnu_85 | 4 | 4 | 0.0000000000422484 |
| Oryza sativa ssp. japonica | chr10 | 6 | CH_osa_230 | 3 | 3 | 0.0000000418381 |
| Petunia axillaris | Peaxi162Scf00174 | 6 | CH_pax_609 | 2 | 2 | 0.000422134 |
| Punica granatum | NC_045134.1 | 6 | CH_pgr_368 | 3 | 5 | 0.00001857 |
| Prunus persica | Pp02 | 6 | CH_ppe_507 | 3 | 4 | 0.0000151863 |
| Papaver somniferum | NW_020620381.1 | 6 | CH_pso_773 | 3 | 4 | 0.000019927 |
| Populus trichocarpa | Chr08 | 6 | CH_ptr_135 | 5 | 6 | 0.00000000000150814 |
| Populus trichocarpa | Chr19 | 6 | CH_ptr_413 | 3 | 3 | 0.0000022802 |
| Quercus lobata | 6 | 6 | CH_qlo_68 | 10 | 13 | 2.31248e-28 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 6 | CH_rch_269 | 5 | 11 | 0.00000000000404077 |
| Salvia bowleyana | GWHASIU00000004 | 6 | CH_sbo_92 | 6 | 7 | 9.22184e-17 |
| Salix brachista | GWHAAZH00000008 | 6 | CH_sbr_159 | 4 | 4 | 0.000000000371602 |
| Salix brachista | GWHAAZH00000019 | 6 | CH_sbr_304 | 3 | 3 | 0.00000131039 |
| Solanum lycopersicum | SL4.0ch04 | 6 | CH_sly_869 | 2 | 2 | 0.000586941 |
| Solanum pennellii | Spenn-ch04 | 6 | CH_spe_698 | 2 | 2 | 0.000266874 |
| Solanum tuberosum | ST4.03ch00 | 6 | CH_stu_896 | 2 | 2 | 0.000768679 |
| Selenicereus undatus | Scaffold_3410 | 6 | CH_sun_166 | 2 | 2 | 0.0000726639 |
| Trochodendron aralioides | group13 | 6 | CH_tar_364 | 3 | 3 | 0.00000196806 |
| Tripterygium wilfordii | NC_052242.1 | 6 | CH_twi_11 | 12 | 32 | 1.07243e-28 |
| Vigna mungo | CM024077.1 | 6 | CH_vmu_178 | 3 | 3 | 0.000000219194 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |