Functional clusters
Information
- Type InterPro
- Description Fatty acyl-CoA reductase, C-terminal
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Actinidia chinensis | Lachesis_group8 | 5 | CH_ach_541 | 2 | 2 | 0.000543213 |
| Brassica carinata | ChrB02 | 5 | CH_bca_796 | 3 | 3 | 0.00000138732 |
| Brassica napus | C09 | 5 | CH_bna_1173 | 3 | 9 | 0.00021505 |
| Capsicum annuum | PGAv.1.6.scaffold1577 | 5 | CH_can_474 | 3 | 5 | 0.0000225073 |
| Cicer arietinum L. | Ca_LG6_v3 | 5 | CH_car_362 | 2 | 2 | 0.000466981 |
| Citrus clementina | scaffold_6 | 5 | CH_ccl_419 | 3 | 5 | 0.00000565047 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3163 | 5 | CH_cqu_520 | 3 | 4 | 0.00000612773 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2493 | 5 | CH_cqu_574 | 3 | 5 | 0.0000153157 |
| Eucalyptus grandis | Chr07 | 5 | CH_egr_809 | 3 | 3 | 0.000000847827 |
| Erythranthe guttata | scaffold_14 | 5 | CH_egut_199 | 4 | 4 | 0.00000000210813 |
| Glycine max | Gm11 | 5 | CH_gma_144 | 4 | 4 | 0.0000000000344506 |
| Malus domestica | Chr03 | 5 | CH_mdo_229 | 4 | 5 | 0.00000000010306 |
| Manihot esculenta | Chromosome11 | 5 | CH_mes_638 | 2 | 2 | 0.000366379 |
| Nelumbo nucifera | chr2 | 5 | CH_nnu_213 | 3 | 3 | 0.000000194901 |
| Nicotiana tabacum | Nitab4.5_0000234 | 5 | CH_nta_141 | 3 | 6 | 0.00000722058 |
| Olea europaea | scaffold775 | 5 | CH_oeu_684 | 2 | 2 | 0.000800683 |
| Papaver somniferum | NC_039358.1 | 5 | CH_pso_369 | 4 | 6 | 0.00000000769013 |
| Papaver somniferum | NC_039363.1 | 5 | CH_pso_722 | 4 | 28 | 0.0000104487 |
| Rosa chinensis | RcHm_v2.0_Chr5 | 5 | CH_rch_926 | 3 | 8 | 0.000029347 |
| Salix brachista | GWHAAZH00000009 | 5 | CH_sbr_604 | 2 | 2 | 0.000378084 |
| Sequoiadendron giganteum | chr5 | 5 | CH_sgi_850 | 4 | 5 | 0.00000000530527 |
| Solanum lycopersicum | SL4.0ch11 | 5 | CH_sly_365 | 3 | 3 | 0.000000620117 |
| Solanum pennellii | Spenn-ch11 | 5 | CH_spe_315 | 3 | 3 | 0.000000249282 |
| Vigna mungo | CM024079.1 | 5 | CH_vmu_647 | 2 | 2 | 0.000969211 |
| Vitis vinifera | chr6 | 5 | CH_vvi_703 | 2 | 2 | 0.000456378 |
| Actinidia chinensis | Lachesis_group8 | 6 | CH_ach_541 | 2 | 2 | 0.000543213 |
| Brassica carinata | ChrB02 | 6 | CH_bca_796 | 3 | 3 | 0.00000138732 |
| Brassica napus | C09 | 6 | CH_bna_1173 | 3 | 9 | 0.00021505 |
| Capsicum annuum | PGAv.1.6.scaffold1577 | 6 | CH_can_474 | 3 | 5 | 0.0000225073 |
| Cicer arietinum L. | Ca_LG6_v3 | 6 | CH_car_362 | 2 | 2 | 0.000466981 |
| Citrus clementina | scaffold_6 | 6 | CH_ccl_419 | 3 | 5 | 0.00000565047 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3163 | 6 | CH_cqu_520 | 3 | 4 | 0.00000612773 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2493 | 6 | CH_cqu_574 | 3 | 5 | 0.0000153157 |
| Eucalyptus grandis | Chr07 | 6 | CH_egr_809 | 3 | 3 | 0.000000847827 |
| Erythranthe guttata | scaffold_14 | 6 | CH_egut_199 | 4 | 4 | 0.00000000210813 |
| Glycine max | Gm11 | 6 | CH_gma_144 | 4 | 4 | 0.0000000000344506 |
| Malus domestica | Chr03 | 6 | CH_mdo_229 | 4 | 5 | 0.00000000010306 |
| Manihot esculenta | Chromosome11 | 6 | CH_mes_638 | 2 | 2 | 0.000366379 |
| Nelumbo nucifera | chr2 | 6 | CH_nnu_213 | 3 | 3 | 0.000000194901 |
| Nicotiana tabacum | Nitab4.5_0000234 | 6 | CH_nta_141 | 3 | 6 | 0.00000722058 |
| Olea europaea | scaffold775 | 6 | CH_oeu_684 | 2 | 2 | 0.000800683 |
| Papaver somniferum | NC_039358.1 | 6 | CH_pso_369 | 4 | 6 | 0.00000000769013 |
| Papaver somniferum | NC_039363.1 | 6 | CH_pso_722 | 4 | 28 | 0.0000104487 |
| Rosa chinensis | RcHm_v2.0_Chr5 | 6 | CH_rch_926 | 3 | 8 | 0.000029347 |
| Salix brachista | GWHAAZH00000009 | 6 | CH_sbr_604 | 2 | 2 | 0.000378084 |
| Sequoiadendron giganteum | chr5 | 6 | CH_sgi_850 | 4 | 5 | 0.00000000530527 |
| Solanum lycopersicum | SL4.0ch11 | 6 | CH_sly_365 | 3 | 3 | 0.000000620117 |
| Solanum pennellii | Spenn-ch11 | 6 | CH_spe_315 | 3 | 3 | 0.000000249282 |
| Vigna mungo | CM024079.1 | 6 | CH_vmu_647 | 2 | 2 | 0.000969211 |
| Vitis vinifera | chr6 | 6 | CH_vvi_703 | 2 | 2 | 0.000456378 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |