Functional clusters

Information

  • Type InterPro
  • Description RNA polymerase I transcription initiation factor TAF1B/Rrn7

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr11 5 CH_acertr_618 2 2 0.000070497
Aquilegia oxysepala CHR05 5 CH_aox_127 3 3 0.0000000385927
Cardamine hirsuta Chr5 5 CH_chi_632 2 2 0.000207361
Eucalyptus grandis Chr02 5 CH_egr_1082 2 2 0.0000585274
Petunia axillaris Peaxi162Scf00342 5 CH_pax_561 2 2 0.000211067
Quercus lobata 3 5 CH_qlo_674 4 31 0.0000000129825
Rosa chinensis RcHm_v2.0_Chr5 5 CH_rch_1250 2 2 0.000239192
Rosa chinensis RcHm_v2.0_Chr7 5 CH_rch_1251 2 2 0.000239192
Acer truncatum chr11 6 CH_acertr_618 2 2 0.000070497
Aquilegia oxysepala CHR05 6 CH_aox_127 3 3 0.0000000385927
Cardamine hirsuta Chr5 6 CH_chi_632 2 2 0.000207361
Eucalyptus grandis Chr02 6 CH_egr_1082 2 2 0.0000585274
Petunia axillaris Peaxi162Scf00342 6 CH_pax_561 2 2 0.000211067
Quercus lobata 3 6 CH_qlo_674 4 31 0.0000000129825
Rosa chinensis RcHm_v2.0_Chr5 6 CH_rch_1250 2 2 0.000239192
Rosa chinensis RcHm_v2.0_Chr7 6 CH_rch_1251 2 2 0.000239192

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001