Functional clusters
Information
- Type InterPro
- Description Phospholipase A1-II
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr10 | 5 | CH_acertr_906 | 2 | 2 | 0.000422982 |
| Arabidopsis lyrata | scaffold_4 | 5 | CH_aly_688 | 2 | 2 | 0.000660044 |
| Amborella trichopoda | AmTr_v1.0_scaffold00064 | 5 | CH_atr_511 | 2 | 2 | 0.000238322 |
| Beta vulgaris | Chr8_EL10_PGA_scaffold4 | 5 | CH_bvu_203 | 3 | 3 | 0.000000359875 |
| Beta vulgaris | Chr9_EL10_PGA_scaffold8 | 5 | CH_bvu_245 | 3 | 4 | 0.00000143926 |
| Camellia sinensis var. sinensis | Chr8 | 5 | CH_camsi_705 | 3 | 5 | 0.00000264874 |
| Capsicum annuum | PGAv.1.6.scaffold702 | 5 | CH_can_16 | 13 | 26 | 1.23666e-31 |
| Corylus avellana | 5 | 5 | CH_cav_133 | 4 | 4 | 0.000000000170376 |
| Corylus avellana | 2 | 5 | CH_cav_284 | 3 | 3 | 0.000000740683 |
| Citrus clementina | scaffold_6 | 5 | CH_ccl_780 | 2 | 2 | 0.000820311 |
| Carpinus fangiana | Cfa01 | 5 | CH_cfa_140 | 4 | 4 | 0.000000000164219 |
| Cardamine hirsuta | Chr1 | 5 | CH_chi_285 | 3 | 3 | 0.000000250835 |
| Carya illinoinensis | Chr04 | 5 | CH_cil_821 | 2 | 2 | 0.000619828 |
| Corchorus olitorius | AWUE01020841.1 | 5 | CH_col_7 | 7 | 8 | 3.92109e-19 |
| Carica papaya | supercontig_25 | 5 | CH_cpa_588 | 2 | 2 | 0.000570396 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2306 | 5 | CH_cqu_149 | 5 | 7 | 0.0000000000208932 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1829 | 5 | CH_cqu_404 | 4 | 11 | 0.000000768449 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1606 | 5 | CH_cqu_591 | 3 | 4 | 0.0000207374 |
| Chenopodium quinoa | C_Quinoa_Scaffold_4266 | 5 | CH_cqu_649 | 3 | 5 | 0.0000518248 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3389 | 5 | CH_cqu_650 | 3 | 5 | 0.0000518248 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3826 | 5 | CH_cqu_651 | 3 | 5 | 0.0000518248 |
| Daucus carota | DCARv2_Chr5 | 5 | CH_dca_617 | 2 | 2 | 0.000382665 |
| Davidia involucrata | GWHABJS00000013 | 5 | CH_din_159 | 6 | 70 | 0.000000000844748 |
| Durio zibethinus | NW_019167982.1 | 5 | CH_dzi_188 | 3 | 3 | 0.000000112784 |
| Eucalyptus grandis | Chr05 | 5 | CH_egr_342 | 6 | 18 | 0.000000000000132317 |
| Eutrema salsugineum | scaffold_10 | 5 | CH_esa_528 | 2 | 2 | 0.000761499 |
| Glycine max | Gm07 | 5 | CH_gma_821 | 2 | 2 | 0.000379557 |
| Hydrangea macrophylla | Hma1.2p1_0155F.1 | 5 | CH_hma_127 | 3 | 3 | 0.0000000740453 |
| Lupinus albus | Lalb_Chr12 | 5 | CH_lal_208 | 3 | 3 | 0.000000231376 |
| Lactuca sativa | Lsat_1_v8_lg_1 | 5 | CH_lsa_138 | 5 | 10 | 0.00000000000166162 |
| Malus domestica | Chr00 | 5 | CH_mdo_1426 | 2 | 2 | 0.000796344 |
| Malus domestica | Chr17 | 5 | CH_mdo_1427 | 2 | 2 | 0.000796344 |
| Manihot esculenta | Chromosome16 | 5 | CH_mes_102 | 5 | 5 | 0.00000000000000584043 |
| Medicago truncatula | chr4 | 5 | CH_mtr_1186 | 2 | 2 | 0.000246518 |
| Nelumbo nucifera | chr1 | 5 | CH_nnu_189 | 3 | 3 | 0.0000000696075 |
| Nicotiana tabacum | Nitab4.5_0000681 | 5 | CH_nta_136 | 3 | 4 | 0.00000404464 |
| Olea europaea | scaffold636 | 5 | CH_oeu_631 | 2 | 2 | 0.000533789 |
| Oryza sativa ssp. japonica | chr01 | 5 | CH_osa_518 | 3 | 15 | 0.0000669239 |
| Petunia axillaris | Peaxi162Scf00223 | 5 | CH_pax_65 | 5 | 8 | 0.0000000000047523 |
| Punica granatum | NC_045130.1 | 5 | CH_pgr_620 | 2 | 2 | 0.000750356 |
| Prunus persica | Pp05 | 5 | CH_ppe_331 | 3 | 3 | 0.0000000834721 |
| Papaver somniferum | NC_039365.1 | 5 | CH_pso_283 | 5 | 47 | 0.00000000037271 |
| Populus trichocarpa | Chr15 | 5 | CH_ptr_806 | 2 | 2 | 0.000867002 |
| Phaseolus vulgaris | Chr03 | 5 | CH_pvu_620 | 2 | 2 | 0.000440836 |
| Quercus lobata | 5 | 5 | CH_qlo_1477 | 2 | 2 | 0.000154887 |
| Rhododendron simsii | chr13 | 5 | CH_rsi_41 | 9 | 11 | 5.16093e-27 |
| Salvia bowleyana | GWHASIU00000005 | 5 | CH_sbo_59 | 7 | 8 | 4.42704e-21 |
| Salix brachista | GWHAAZH00000015 | 5 | CH_sbr_138 | 4 | 4 | 0.0000000000525497 |
| Solanum lycopersicum | SL4.0ch02 | 5 | CH_sly_21 | 12 | 44 | 2.54971e-28 |
| Schrenkiella parvula | ch4-6 | 5 | CH_spa_375 | 2 | 2 | 0.00078734 |
| Solanum pennellii | Spenn-ch02 | 5 | CH_spe_13 | 11 | 42 | 6.88779e-27 |
| Solanum tuberosum | ST4.03ch02 | 5 | CH_stu_16 | 14 | 52 | 3.66616e-33 |
| Selenicereus undatus | Scaffold_33676 | 5 | CH_sun_287 | 2 | 2 | 0.000217992 |
| Trochodendron aralioides | group9 | 5 | CH_tar_903 | 2 | 2 | 0.000600366 |
| Trochodendron aralioides | group3 | 5 | CH_tar_904 | 2 | 2 | 0.000600366 |
| Theobroma cacao | Chromosome_6 | 5 | CH_tca_55 | 6 | 6 | 3.98402e-18 |
| Vaccinium macrocarpon | chr9_Vaccinium_macrocarpon_Stevens_v1 | 5 | CH_vma_155 | 3 | 3 | 0.0000000129529 |
| Acer truncatum | chr10 | 6 | CH_acertr_906 | 2 | 2 | 0.000422982 |
| Arabidopsis lyrata | scaffold_4 | 6 | CH_aly_688 | 2 | 2 | 0.000660044 |
| Amborella trichopoda | AmTr_v1.0_scaffold00064 | 6 | CH_atr_511 | 2 | 2 | 0.000238322 |
| Beta vulgaris | Chr8_EL10_PGA_scaffold4 | 6 | CH_bvu_203 | 3 | 3 | 0.000000359875 |
| Beta vulgaris | Chr9_EL10_PGA_scaffold8 | 6 | CH_bvu_245 | 3 | 4 | 0.00000143926 |
| Camellia sinensis var. sinensis | Chr8 | 6 | CH_camsi_705 | 3 | 5 | 0.00000264874 |
| Capsicum annuum | PGAv.1.6.scaffold702 | 6 | CH_can_16 | 13 | 26 | 1.23666e-31 |
| Corylus avellana | 5 | 6 | CH_cav_133 | 4 | 4 | 0.000000000170376 |
| Corylus avellana | 2 | 6 | CH_cav_284 | 3 | 3 | 0.000000740683 |
| Citrus clementina | scaffold_6 | 6 | CH_ccl_780 | 2 | 2 | 0.000820311 |
| Carpinus fangiana | Cfa01 | 6 | CH_cfa_140 | 4 | 4 | 0.000000000164219 |
| Cardamine hirsuta | Chr1 | 6 | CH_chi_285 | 3 | 3 | 0.000000250835 |
| Carya illinoinensis | Chr04 | 6 | CH_cil_821 | 2 | 2 | 0.000619828 |
| Corchorus olitorius | AWUE01020841.1 | 6 | CH_col_7 | 7 | 8 | 3.92109e-19 |
| Carica papaya | supercontig_25 | 6 | CH_cpa_588 | 2 | 2 | 0.000570396 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2306 | 6 | CH_cqu_149 | 5 | 7 | 0.0000000000208932 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1829 | 6 | CH_cqu_404 | 4 | 11 | 0.000000768449 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1606 | 6 | CH_cqu_591 | 3 | 4 | 0.0000207374 |
| Chenopodium quinoa | C_Quinoa_Scaffold_4266 | 6 | CH_cqu_649 | 3 | 5 | 0.0000518248 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3389 | 6 | CH_cqu_650 | 3 | 5 | 0.0000518248 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3826 | 6 | CH_cqu_651 | 3 | 5 | 0.0000518248 |
| Daucus carota | DCARv2_Chr5 | 6 | CH_dca_617 | 2 | 2 | 0.000382665 |
| Davidia involucrata | GWHABJS00000013 | 6 | CH_din_159 | 6 | 70 | 0.000000000844748 |
| Durio zibethinus | NW_019167982.1 | 6 | CH_dzi_188 | 3 | 3 | 0.000000112784 |
| Eucalyptus grandis | Chr05 | 6 | CH_egr_342 | 6 | 18 | 0.000000000000132317 |
| Eutrema salsugineum | scaffold_10 | 6 | CH_esa_528 | 2 | 2 | 0.000761499 |
| Fragaria x ananassa | Fvb3-1 | 6 | CH_fan_844 | 3 | 8 | 0.000116653 |
| Glycine max | Gm07 | 6 | CH_gma_821 | 2 | 2 | 0.000379557 |
| Hydrangea macrophylla | Hma1.2p1_0155F.1 | 6 | CH_hma_127 | 3 | 3 | 0.0000000740453 |
| Lupinus albus | Lalb_Chr12 | 6 | CH_lal_208 | 3 | 3 | 0.000000231376 |
| Lactuca sativa | Lsat_1_v8_lg_1 | 6 | CH_lsa_138 | 5 | 10 | 0.00000000000166162 |
| Malus domestica | Chr00 | 6 | CH_mdo_1426 | 2 | 2 | 0.000796344 |
| Malus domestica | Chr17 | 6 | CH_mdo_1427 | 2 | 2 | 0.000796344 |
| Manihot esculenta | Chromosome16 | 6 | CH_mes_102 | 5 | 5 | 0.00000000000000584043 |
| Medicago truncatula | chr4 | 6 | CH_mtr_1186 | 2 | 2 | 0.000246518 |
| Nelumbo nucifera | chr1 | 6 | CH_nnu_189 | 3 | 3 | 0.0000000696075 |
| Nicotiana tabacum | Nitab4.5_0000681 | 6 | CH_nta_136 | 3 | 4 | 0.00000404464 |
| Olea europaea | scaffold636 | 6 | CH_oeu_631 | 2 | 2 | 0.000533789 |
| Oryza sativa ssp. japonica | chr01 | 6 | CH_osa_518 | 3 | 15 | 0.0000669239 |
| Petunia axillaris | Peaxi162Scf00223 | 6 | CH_pax_65 | 5 | 8 | 0.0000000000047523 |
| Punica granatum | NC_045130.1 | 6 | CH_pgr_620 | 2 | 2 | 0.000750356 |
| Prunus persica | Pp05 | 6 | CH_ppe_331 | 3 | 3 | 0.0000000834721 |
| Papaver somniferum | NC_039365.1 | 6 | CH_pso_283 | 5 | 47 | 0.00000000037271 |
| Populus trichocarpa | Chr15 | 6 | CH_ptr_806 | 2 | 2 | 0.000867002 |
| Phaseolus vulgaris | Chr03 | 6 | CH_pvu_620 | 2 | 2 | 0.000440836 |
| Quercus lobata | 5 | 6 | CH_qlo_1477 | 2 | 2 | 0.000154887 |
| Rhododendron simsii | chr13 | 6 | CH_rsi_41 | 9 | 11 | 5.16093e-27 |
| Salvia bowleyana | GWHASIU00000005 | 6 | CH_sbo_59 | 7 | 8 | 4.42704e-21 |
| Salix brachista | GWHAAZH00000015 | 6 | CH_sbr_138 | 4 | 4 | 0.0000000000525497 |
| Solanum lycopersicum | SL4.0ch02 | 6 | CH_sly_21 | 12 | 44 | 2.54971e-28 |
| Schrenkiella parvula | ch4-6 | 6 | CH_spa_375 | 2 | 2 | 0.00078734 |
| Solanum pennellii | Spenn-ch02 | 6 | CH_spe_13 | 11 | 42 | 6.88779e-27 |
| Solanum tuberosum | ST4.03ch02 | 6 | CH_stu_16 | 14 | 52 | 3.66616e-33 |
| Selenicereus undatus | Scaffold_33676 | 6 | CH_sun_287 | 2 | 2 | 0.000217992 |
| Trochodendron aralioides | group9 | 6 | CH_tar_903 | 2 | 2 | 0.000600366 |
| Trochodendron aralioides | group3 | 6 | CH_tar_904 | 2 | 2 | 0.000600366 |
| Theobroma cacao | Chromosome_6 | 6 | CH_tca_55 | 6 | 6 | 3.98402e-18 |
| Vaccinium macrocarpon | chr9_Vaccinium_macrocarpon_Stevens_v1 | 6 | CH_vma_155 | 3 | 3 | 0.0000000129529 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |