Functional clusters

Information

  • Type InterPro
  • Description E3 ubiquitin-protein ligase BAH1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_344 5 CH_aag_207 2 2 0.0000802568
Acer truncatum chr5 5 CH_acertr_779 2 2 0.000211491
Actinidia chinensis Lachesis_group5 5 CH_ach_540 2 2 0.000543213
Brassica carinata ChrC07 5 CH_bca_1750 3 32 0.000407181
Brassica napus A09 5 CH_bna_1519 2 2 0.000835275
Brassica rapa A09 5 CH_bra_530 2 2 0.000429314
Corylus avellana 2 5 CH_cav_121 4 5 0.0000000000338025
Citrus clementina scaffold_3 5 CH_ccl_729 2 2 0.000492187
Carpinus fangiana Cfa02 5 CH_cfa_109 4 4 0.00000000000651664
Carya illinoinensis Chr08 5 CH_cil_312 3 3 0.0000000576299
Davidia involucrata GWHABJS00000007 5 CH_din_584 2 2 0.000150038
Lonicera japonica GWHAAZE00000002 5 CH_lonja_941 2 2 0.000179662
Malus domestica Chr03 5 CH_mdo_219 4 5 0.0000000000572564
Medicago truncatula chr8 5 CH_mtr_832 3 12 0.0000111349
Punica granatum NC_045131.1 5 CH_pgr_566 2 2 0.000450214
Quercus lobata 7 5 CH_qlo_1723 2 2 0.000516289
Salix brachista GWHAAZH00000014 5 CH_sbr_668 2 2 0.00063014
Schrenkiella parvula ch1-1 5 CH_spa_294 2 2 0.000236202
Selenicereus undatus Scaffold_33675 5 CH_sun_286 2 2 0.000217992
Anthoceros agrestis Sc2ySwM_344 6 CH_aag_207 2 2 0.0000802568
Acer truncatum chr5 6 CH_acertr_779 2 2 0.000211491
Actinidia chinensis Lachesis_group5 6 CH_ach_540 2 2 0.000543213
Brassica carinata ChrC07 6 CH_bca_1750 3 32 0.000407181
Brassica napus A09 6 CH_bna_1519 2 2 0.000835275
Brassica rapa A09 6 CH_bra_530 2 2 0.000429314
Corylus avellana 2 6 CH_cav_121 4 5 0.0000000000338025
Citrus clementina scaffold_3 6 CH_ccl_729 2 2 0.000492187
Carpinus fangiana Cfa02 6 CH_cfa_109 4 4 0.00000000000651664
Carya illinoinensis Chr08 6 CH_cil_312 3 3 0.0000000576299
Davidia involucrata GWHABJS00000007 6 CH_din_584 2 2 0.000150038
Lonicera japonica GWHAAZE00000002 6 CH_lonja_941 2 2 0.000179662
Malus domestica Chr03 6 CH_mdo_219 4 5 0.0000000000572564
Medicago truncatula chr8 6 CH_mtr_832 3 12 0.0000111349
Punica granatum NC_045131.1 6 CH_pgr_566 2 2 0.000450214
Quercus lobata 7 6 CH_qlo_1723 2 2 0.000516289
Salix brachista GWHAAZH00000014 6 CH_sbr_668 2 2 0.00063014
Schrenkiella parvula ch1-1 6 CH_spa_294 2 2 0.000236202
Selenicereus undatus Scaffold_33675 6 CH_sun_286 2 2 0.000217992

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001