Functional clusters

Information

  • Type InterPro
  • Description PGAP5/Cdc1/Ted1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group1 5 CH_ach_538 2 2 0.000543213
Gossypium hirsutum A13 5 CH_ghi_1054 2 2 0.000267016
Hydrangea macrophylla Hma1.2p1_1104F.1 5 CH_hma_445 2 2 0.000111086
Malus domestica Chr15 5 CH_mdo_1115 2 2 0.000227527
Medicago truncatula chr8 5 CH_mtr_1092 2 2 0.000123259
Quercus lobata 3 5 CH_qlo_1476 2 2 0.000154887
Sequoiadendron giganteum chr4 5 CH_sgi_2119 2 2 0.000146145
Solanum tuberosum ST4.03ch12 5 CH_stu_611 2 2 0.0000512453
Vaccinium macrocarpon chr10_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_620 2 2 0.000278772
Actinidia chinensis Lachesis_group1 6 CH_ach_538 2 2 0.000543213
Gossypium hirsutum A13 6 CH_ghi_1054 2 2 0.000267016
Hydrangea macrophylla Hma1.2p1_1104F.1 6 CH_hma_445 2 2 0.000111086
Malus domestica Chr15 6 CH_mdo_1115 2 2 0.000227527
Medicago truncatula chr8 6 CH_mtr_1092 2 2 0.000123259
Quercus lobata 3 6 CH_qlo_1476 2 2 0.000154887
Sequoiadendron giganteum chr4 6 CH_sgi_2119 2 2 0.000146145
Solanum tuberosum ST4.03ch12 6 CH_stu_611 2 2 0.0000512453
Vaccinium macrocarpon chr10_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_620 2 2 0.000278772

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001