Functional clusters

Information

  • Type InterPro
  • Description Erlin1/2

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Camellia sinensis var. sinensis Chr12 5 CH_camsi_1092 2 2 0.000137564
Eucalyptus grandis Chr02 5 CH_egr_705 3 6 0.000000102758
Gossypium hirsutum A13 5 CH_ghi_966 2 2 0.000160209
Gossypium raimondii Chr08 5 CH_gra_519 2 2 0.000160832
Papaver somniferum NC_039362.1 5 CH_pso_978 2 2 0.000135176
Papaver somniferum NC_039361.1 5 CH_pso_979 2 2 0.000135176
Quercus lobata 3 5 CH_qlo_89 10 31 2.34064e-25
Rosa chinensis RcHm_v2.0_Chr4 5 CH_rch_1091 2 3 0.000119593
Sequoiadendron giganteum chr3 5 CH_sgi_1163 3 4 0.000000284764
Sequoiadendron giganteum chr3 5 CH_sgi_2583 2 2 0.000730727
Selenicereus undatus Scaffold_3410 5 CH_sun_285 2 2 0.000217992
Theobroma cacao Chromosome_2 5 CH_tca_671 2 4 0.000439399
Camellia sinensis var. sinensis Chr12 6 CH_camsi_1092 2 2 0.000137564
Eucalyptus grandis Chr02 6 CH_egr_705 3 6 0.000000102758
Gossypium hirsutum A13 6 CH_ghi_966 2 2 0.000160209
Gossypium raimondii Chr08 6 CH_gra_519 2 2 0.000160832
Papaver somniferum NC_039362.1 6 CH_pso_978 2 2 0.000135176
Papaver somniferum NC_039361.1 6 CH_pso_979 2 2 0.000135176
Quercus lobata 3 6 CH_qlo_89 10 31 2.34064e-25
Rosa chinensis RcHm_v2.0_Chr4 6 CH_rch_1091 2 3 0.000119593
Sequoiadendron giganteum chr3 6 CH_sgi_1163 3 4 0.000000284764
Sequoiadendron giganteum chr3 6 CH_sgi_2583 2 2 0.000730727
Selenicereus undatus Scaffold_3410 6 CH_sun_285 2 2 0.000217992
Theobroma cacao Chromosome_2 6 CH_tca_671 2 4 0.000439399

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001