Functional clusters

Information

  • Type InterPro
  • Description Vam6/VPS39/TRAP1 family

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica napus C03 5 CH_bna_1318 2 2 0.000389795
Brassica oleracea C3 5 CH_bol_176 3 3 0.00000000641041
Ceratophyllum demersum 2 5 CH_cde_436 2 2 0.000473878
Carica papaya supercontig_21 5 CH_cpa_30 4 4 0.00000000000257786
Cucumis sativus L. chr4 5 CH_csa_184 3 3 0.000000104528
Lupinus albus Lalb_Chr16 5 CH_lal_631 2 2 0.000314895
Lonicera japonica GWHAAZE00000001 5 CH_lonja_940 2 2 0.000179662
Olea europaea chr17 5 CH_oeu_550 2 2 0.000320273
Rosa chinensis RcHm_v2.0_Chr2 5 CH_rch_1186 3 49 0.000175402
Sequoiadendron giganteum chr3 5 CH_sgi_2309 2 2 0.000292291
Sapria himalayana scaffold94_1542895 5 CH_shi_49 4 5 0.0000000000140223
Theobroma cacao Chromosome_1 5 CH_tca_693 2 2 0.000439432
Trifolium pratense Tp57577_TGAC_v2_scaf_423 5 CH_tpr_53 5 8 0.000000000000289573
Utricularia gibba unitig_747 5 CH_ugi_271 2 2 0.000246144
Vanilla planifolia CM028150.1 5 CH_vpl_546 2 2 0.000221664
Brassica napus C03 6 CH_bna_1318 2 2 0.000389795
Brassica oleracea C3 6 CH_bol_176 3 3 0.00000000641041
Ceratophyllum demersum 2 6 CH_cde_436 2 2 0.000473878
Carica papaya supercontig_21 6 CH_cpa_30 4 4 0.00000000000257786
Cucumis sativus L. chr4 6 CH_csa_184 3 3 0.000000104528
Lupinus albus Lalb_Chr16 6 CH_lal_631 2 2 0.000314895
Lonicera japonica GWHAAZE00000001 6 CH_lonja_940 2 2 0.000179662
Olea europaea chr17 6 CH_oeu_550 2 2 0.000320273
Rosa chinensis RcHm_v2.0_Chr2 6 CH_rch_1186 3 49 0.000175402
Sequoiadendron giganteum chr3 6 CH_sgi_2309 2 2 0.000292291
Sapria himalayana scaffold94_1542895 6 CH_shi_49 4 5 0.0000000000140223
Theobroma cacao Chromosome_1 6 CH_tca_693 2 2 0.000439432
Trifolium pratense Tp57577_TGAC_v2_scaf_423 6 CH_tpr_53 5 8 0.000000000000289573
Utricularia gibba unitig_747 6 CH_ugi_271 2 2 0.000246144
Vanilla planifolia CM028150.1 6 CH_vpl_546 2 2 0.000221664

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001