Functional clusters

Information

  • Type InterPro
  • Description Wall-associated receptor kinase, C-terminal

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group21 5 CH_ach_178 3 3 0.00000201397
Actinidia chinensis Lachesis_group4 5 CH_ach_179 3 3 0.00000201397
Arabidopsis lyrata scaffold_2 5 CH_aly_11 12 22 7.88901e-31
Arabidopsis lyrata scaffold_7 5 CH_aly_475 3 6 0.000126487
Amaranthus hybridus AmaHy_arrow1_Scaffold_16 5 CH_amhyb_48 5 7 0.000000000160747
Aquilegia oxysepala CHR06 5 CH_aox_166 4 7 0.000000323629
Aquilegia oxysepala CHR03 5 CH_aox_220 4 11 0.00000304422
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.15 5 CH_arhy_105 9 16 2.14271e-20
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.05 5 CH_arhy_267 6 12 0.00000000000696956
Arabidopsis thaliana Chr1 5 CH_ath_73 6 32 0.00000000000037449
Amborella trichopoda AmTr_v1.0_scaffold00079 5 CH_atr_205 4 16 0.0000000956617
Brassica carinata ChrC05 5 CH_bca_1626 4 32 0.000260321
Brassica carinata ChrC08 5 CH_bca_246 5 8 0.000000000205761
Brassica carinata ChrC03 5 CH_bca_386 5 14 0.00000000733743
Brassica carinata ChrB05 5 CH_bca_67 8 23 1.99377e-16
Brassica napus C06 5 CH_bna_1349 3 7 0.000500649
Brassica napus A02 5 CH_bna_199 5 7 0.0000000000713614
Brassica oleracea C2 5 CH_bol_38 8 34 7.42521e-16
Beta vulgaris Chr2_EL10_PGA_scaffold6 5 CH_bvu_195 4 7 0.000000230614
Camellia sinensis var. sinensis Chr12 5 CH_camsi_1028 3 6 0.000127529
Cannabis sativa NC_044373.1 5 CH_cansat_278 4 17 0.00000201601
Capsicum annuum PGAv.1.6.scaffold986 5 CH_can_453 3 3 0.0000136154
Capsicum annuum PGAv.1.6.scaffold1129 5 CH_can_454 3 3 0.0000136154
Corylus avellana 5 5 CH_cav_407 4 20 0.0000154836
Corylus avellana 7 5 CH_cav_57 7 15 0.00000000000000199691
Coffea canephora chr4 5 CH_ccan_114 4 23 0.00000000373336
Coffea canephora chr7 5 CH_ccan_123 4 27 0.00000000739844
Citrus clementina scaffold_3 5 CH_ccl_49 9 11 4.99366e-22
Carpinus fangiana Cfa06 5 CH_cfa_97 6 15 0.00000000000140067
Cardamine hirsuta Chr2 5 CH_chi_13 13 35 1.37845e-28
Carya illinoinensis Chr03 5 CH_cil_148 7 20 0.00000000000146545
Carya illinoinensis Chr15 5 CH_cil_22 12 18 7.97557e-29
Carica papaya supercontig_170 5 CH_cpa_148 4 9 0.000000160499
Carica papaya supercontig_3 5 CH_cpa_71 4 4 0.00000000127604
Chenopodium quinoa C_Quinoa_Scaffold_2088 5 CH_cqu_222 5 8 0.00000000139017
Chenopodium quinoa C_Quinoa_Scaffold_1710 5 CH_cqu_248 5 10 0.00000000624684
Chenopodium quinoa C_Quinoa_Scaffold_3429 5 CH_cqu_613 3 3 0.0000332727
Capsella rubella scaffold_2 5 CH_cru_17 10 17 3.59882e-25
Cucumis sativus L. chr1 5 CH_csa_69 6 9 0.0000000000000947246
Davidia involucrata GWHABJS00000012 5 CH_din_161 5 8 0.000000000851477
Davidia involucrata GWHABJS00000014 5 CH_din_500 3 4 0.0000981652
Davidia involucrata GWHABJS00000018 5 CH_din_94 7 18 0.000000000000261971
Durio zibethinus NW_019168048.1 5 CH_dzi_354 5 66 0.0000295491
Eucalyptus grandis Chr06 5 CH_egr_291 11 67 0.00000000000000614942
Eucalyptus grandis Chr02 5 CH_egr_4 25 37 1.34861e-58
Eucalyptus grandis Chr06 5 CH_egr_841 4 5 0.000001367
Erythranthe guttata scaffold_12 5 CH_egut_156 5 7 0.000000000068591
Erythranthe guttata scaffold_12 5 CH_egut_157 5 7 0.000000000068591
Erythranthe guttata scaffold_8 5 CH_egut_274 4 6 0.0000000840956
Eutrema salsugineum scaffold_14 5 CH_esa_294 3 8 0.0000272539
Fragaria vesca Fvb5 5 CH_fve_486 3 4 0.0000116572
Gossypium hirsutum D09 5 CH_ghi_525 4 6 0.000000446528
Gossypium hirsutum D11 5 CH_ghi_81 10 17 8.54239e-23
Gossypium hirsutum A11 5 CH_ghi_95 9 14 1.26809e-20
Glycine max Gm07 5 CH_gma_27 10 17 5.71333e-24
Glycine max Gm18 5 CH_gma_512 3 3 0.0000154295
Gossypium raimondii Chr07 5 CH_gra_45 9 15 2.76514e-21
Helianthus annuus HanXRQChr11 5 CH_han_288 6 38 0.000000000713248
Helianthus annuus HanXRQChr11 5 CH_han_638 3 3 0.00000453366
Lupinus albus Lalb_Chr14 5 CH_lal_117 4 4 0.00000000168105
Lotus japonicus chr5 5 CH_lja_496 3 8 0.000291485
Lonicera japonica GWHAAZE00000009 5 CH_lonja_213 6 10 0.00000000000107529
Lonicera japonica GWHAAZE00000002 5 CH_lonja_261 5 6 0.0000000000467107
Lonicera japonica GWHAAZE00000004 5 CH_lonja_368 5 13 0.0000000099789
Lonicera japonica GWHAAZE00000005 5 CH_lonja_648 3 3 0.0000157362
Lactuca sativa Lsat_1_v8_lg_8 5 CH_lsa_585 4 29 0.0000371961
Lactuca sativa Lsat_1_v8_lg_4 5 CH_lsa_97 6 8 0.00000000000000613065
Magnolia biondii Chr06 5 CH_mbi_329 4 7 0.0000000164075
Magnolia biondii Chr16 5 CH_mbi_397 4 10 0.0000000983748
Malus domestica Chr13 5 CH_mdo_1338 4 43 0.000624754
Malus domestica Chr06 5 CH_mdo_143 6 10 0.000000000000272394
Malus domestica Chr17 5 CH_mdo_444 4 6 0.0000000771503
Malus domestica Chr09 5 CH_mdo_719 3 3 0.000009696
Manihot esculenta Chromosome01 5 CH_mes_481 3 5 0.0000541553
Medicago truncatula chr7 5 CH_mtr_106 8 15 1.71543e-18
Nelumbo nucifera chr4 5 CH_nnu_102 6 29 0.000000000205178
Nelumbo nucifera chr3 5 CH_nnu_305 4 20 0.00000746654
Oryza sativa ssp. japonica chr01 5 CH_osa_200 4 7 0.00000000473771
Oryza sativa ssp. japonica chr01 5 CH_osa_47 8 33 4.87213e-18
Petunia axillaris Peaxi162Scf00634 5 CH_pax_325 3 3 0.00000846466
Prunus persica Pp03 5 CH_ppe_24 11 13 7.23573e-29
Pisum sativum chr3LG5 5 CH_psa_754 3 14 0.000829441
Populus trichocarpa Chr17 5 CH_ptr_23 12 15 4.73994e-30
Quercus lobata 3 5 CH_qlo_1029 6 68 0.00000386623
Quercus lobata 10 5 CH_qlo_1633 3 5 0.000425582
Quercus lobata 10 5 CH_qlo_178 9 16 2.85469e-19
Quercus lobata CM012294 5 CH_qlo_603 7 48 0.00000000239063
Quercus lobata 3 5 CH_qlo_928 5 21 0.000000802402
Rosa chinensis RcHm_v2.0_Chr7 5 CH_rch_51 11 20 3.61719e-27
Rosa chinensis RcHm_v2.0_Chr6 5 CH_rch_850 3 3 0.00000967866
Salvia bowleyana GWHASIU00000004 5 CH_sbo_20 16 53 2.08943e-35
Salix brachista GWHAAZH00000017 5 CH_sbr_33 9 13 9.69808e-21
Salix brachista GWHAAZH00000004 5 CH_sbr_81 6 6 0.000000000000024767
Simmondsia chinensis GWHAASQ00000014 5 CH_sci_175 3 3 0.000000913446
Sechium edule LG01 5 CH_sed_105 4 4 0.00000000259286
Solanum pennellii Spenn-ch02 5 CH_spe_288 4 9 0.000000128749
Selenicereus undatus Scaffold_33677 5 CH_sun_220 3 7 0.00010077
Trochodendron aralioides group0 5 CH_tar_415 4 22 0.00000859422
Theobroma cacao Chromosome_3 5 CH_tca_113 6 11 0.000000000000269756
Tarenaya hassleriana NW_010966881.1 5 CH_tha_158 3 5 0.00000409681
Trifolium pratense Tp57577_TGAC_v2_LG4 5 CH_tpr_61 5 5 0.00000000000073967
Tripterygium wilfordii NC_052246.1 5 CH_twi_305 3 4 0.0000152127
Tripterygium wilfordii NC_052251.1 5 CH_twi_365 3 6 0.0000760114
Vaccinium macrocarpon chr12_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_331 3 3 0.0000072536
Vigna mungo CM024070.1 5 CH_vmu_130 4 4 0.0000000192233
Vigna mungo CM024077.1 5 CH_vmu_7 13 41 9.51008e-27
Vitis vinifera chr17 5 CH_vvi_196 4 4 0.00000000180229
Zea mays 3 5 CH_zma_55 5 9 0.00000000000162711
Actinidia chinensis Lachesis_group21 6 CH_ach_178 3 3 0.00000201397
Actinidia chinensis Lachesis_group4 6 CH_ach_179 3 3 0.00000201397
Arabidopsis lyrata scaffold_2 6 CH_aly_11 12 22 7.88901e-31
Arabidopsis lyrata scaffold_7 6 CH_aly_475 3 6 0.000126487
Amaranthus hybridus AmaHy_arrow1_Scaffold_16 6 CH_amhyb_48 5 7 0.000000000160747
Aquilegia oxysepala CHR06 6 CH_aox_166 4 7 0.000000323629
Aquilegia oxysepala CHR03 6 CH_aox_220 4 11 0.00000304422
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.15 6 CH_arhy_105 9 16 2.14271e-20
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.05 6 CH_arhy_267 6 12 0.00000000000696956
Arabidopsis thaliana Chr1 6 CH_ath_73 6 32 0.00000000000037449
Amborella trichopoda AmTr_v1.0_scaffold00079 6 CH_atr_205 4 16 0.0000000956617
Brassica carinata ChrC05 6 CH_bca_1626 4 32 0.000260321
Brassica carinata ChrC08 6 CH_bca_246 5 8 0.000000000205761
Brassica carinata ChrC03 6 CH_bca_386 5 14 0.00000000733743
Brassica carinata ChrB05 6 CH_bca_67 8 23 1.99377e-16
Brassica napus C06 6 CH_bna_1349 3 7 0.000500649
Brassica napus A02 6 CH_bna_199 5 7 0.0000000000713614
Brassica oleracea C2 6 CH_bol_38 8 34 7.42521e-16
Beta vulgaris Chr2_EL10_PGA_scaffold6 6 CH_bvu_195 4 7 0.000000230614
Camellia sinensis var. sinensis Chr12 6 CH_camsi_1028 3 6 0.000127529
Cannabis sativa NC_044373.1 6 CH_cansat_278 4 17 0.00000201601
Capsicum annuum PGAv.1.6.scaffold986 6 CH_can_453 3 3 0.0000136154
Capsicum annuum PGAv.1.6.scaffold1129 6 CH_can_454 3 3 0.0000136154
Corylus avellana 5 6 CH_cav_407 4 20 0.0000154836
Corylus avellana 7 6 CH_cav_57 7 15 0.00000000000000199691
Coffea canephora chr4 6 CH_ccan_114 4 23 0.00000000373336
Coffea canephora chr7 6 CH_ccan_123 4 27 0.00000000739844
Citrus clementina scaffold_3 6 CH_ccl_49 9 11 4.99366e-22
Carpinus fangiana Cfa06 6 CH_cfa_97 6 15 0.00000000000140067
Cardamine hirsuta Chr2 6 CH_chi_13 13 35 1.37845e-28
Carya illinoinensis Chr03 6 CH_cil_148 7 20 0.00000000000146545
Carya illinoinensis Chr15 6 CH_cil_22 12 18 7.97557e-29
Cucumis melo chr12 6 CH_cme_123 4 6 0.00000000440731
Carica papaya supercontig_170 6 CH_cpa_148 4 9 0.000000160499
Carica papaya supercontig_3 6 CH_cpa_71 4 4 0.00000000127604
Chenopodium quinoa C_Quinoa_Scaffold_2088 6 CH_cqu_222 5 8 0.00000000139017
Chenopodium quinoa C_Quinoa_Scaffold_1710 6 CH_cqu_248 5 10 0.00000000624684
Chenopodium quinoa C_Quinoa_Scaffold_3429 6 CH_cqu_613 3 3 0.0000332727
Capsella rubella scaffold_2 6 CH_cru_17 10 17 3.59882e-25
Cucumis sativus L. chr1 6 CH_csa_69 6 9 0.0000000000000947246
Davidia involucrata GWHABJS00000012 6 CH_din_161 5 8 0.000000000851477
Davidia involucrata GWHABJS00000014 6 CH_din_500 3 4 0.0000981652
Davidia involucrata GWHABJS00000018 6 CH_din_94 7 18 0.000000000000261971
Durio zibethinus NW_019168048.1 6 CH_dzi_354 5 66 0.0000295491
Eucalyptus grandis Chr06 6 CH_egr_291 11 67 0.00000000000000614942
Eucalyptus grandis Chr02 6 CH_egr_4 25 37 1.34861e-58
Eucalyptus grandis Chr06 6 CH_egr_841 4 5 0.000001367
Erythranthe guttata scaffold_12 6 CH_egut_156 5 7 0.000000000068591
Erythranthe guttata scaffold_12 6 CH_egut_157 5 7 0.000000000068591
Erythranthe guttata scaffold_8 6 CH_egut_274 4 6 0.0000000840956
Eutrema salsugineum scaffold_14 6 CH_esa_294 3 8 0.0000272539
Fragaria x ananassa Fvb5-4 6 CH_fan_1007 3 6 0.000387984
Fragaria x ananassa Fvb5-1 6 CH_fan_300 4 5 0.0000000529902
Fragaria x ananassa Fvb5-1 6 CH_fan_914 3 5 0.000194073
Fragaria vesca Fvb5 6 CH_fve_486 3 4 0.0000116572
Gossypium hirsutum D09 6 CH_ghi_525 4 6 0.000000446528
Gossypium hirsutum D11 6 CH_ghi_81 10 17 8.54239e-23
Gossypium hirsutum A11 6 CH_ghi_95 9 14 1.26809e-20
Glycine max Gm07 6 CH_gma_27 10 17 5.71333e-24
Glycine max Gm18 6 CH_gma_512 3 3 0.0000154295
Gossypium raimondii Chr07 6 CH_gra_45 9 15 2.76514e-21
Helianthus annuus HanXRQChr11 6 CH_han_288 6 38 0.000000000713248
Helianthus annuus HanXRQChr11 6 CH_han_638 3 3 0.00000453366
Lupinus albus Lalb_Chr14 6 CH_lal_117 4 4 0.00000000168105
Lotus japonicus chr5 6 CH_lja_496 3 8 0.000291485
Lonicera japonica GWHAAZE00000009 6 CH_lonja_213 6 10 0.00000000000107529
Lonicera japonica GWHAAZE00000002 6 CH_lonja_261 5 6 0.0000000000467107
Lonicera japonica GWHAAZE00000004 6 CH_lonja_368 5 13 0.0000000099789
Lonicera japonica GWHAAZE00000005 6 CH_lonja_648 3 3 0.0000157362
Lactuca sativa Lsat_1_v8_lg_8 6 CH_lsa_585 4 29 0.0000371961
Lactuca sativa Lsat_1_v8_lg_4 6 CH_lsa_97 6 8 0.00000000000000613065
Magnolia biondii Chr06 6 CH_mbi_329 4 7 0.0000000164075
Magnolia biondii Chr16 6 CH_mbi_397 4 10 0.0000000983748
Malus domestica Chr13 6 CH_mdo_1338 4 43 0.000624754
Malus domestica Chr06 6 CH_mdo_143 6 10 0.000000000000272394
Malus domestica Chr17 6 CH_mdo_444 4 6 0.0000000771503
Malus domestica Chr09 6 CH_mdo_719 3 3 0.000009696
Manihot esculenta Chromosome01 6 CH_mes_481 3 5 0.0000541553
Medicago truncatula chr7 6 CH_mtr_106 8 15 1.71543e-18
Nelumbo nucifera chr4 6 CH_nnu_102 6 29 0.000000000205178
Nelumbo nucifera chr3 6 CH_nnu_305 4 20 0.00000746654
Oryza sativa ssp. japonica chr01 6 CH_osa_200 4 7 0.00000000473771
Oryza sativa ssp. japonica chr01 6 CH_osa_47 8 33 4.87213e-18
Petunia axillaris Peaxi162Scf00634 6 CH_pax_325 3 3 0.00000846466
Prunus persica Pp03 6 CH_ppe_24 11 13 7.23573e-29
Pisum sativum chr3LG5 6 CH_psa_754 3 14 0.000829441
Populus trichocarpa Chr17 6 CH_ptr_23 12 15 4.73994e-30
Quercus lobata 3 6 CH_qlo_1029 6 68 0.00000386623
Quercus lobata 10 6 CH_qlo_1633 3 5 0.000425582
Quercus lobata 10 6 CH_qlo_178 9 16 2.85469e-19
Quercus lobata CM012294 6 CH_qlo_603 7 48 0.00000000239063
Quercus lobata 3 6 CH_qlo_928 5 21 0.000000802402
Rosa chinensis RcHm_v2.0_Chr7 6 CH_rch_51 11 20 3.61719e-27
Rosa chinensis RcHm_v2.0_Chr6 6 CH_rch_850 3 3 0.00000967866
Salvia bowleyana GWHASIU00000004 6 CH_sbo_20 16 53 2.08943e-35
Salix brachista GWHAAZH00000017 6 CH_sbr_33 9 13 9.69808e-21
Salix brachista GWHAAZH00000004 6 CH_sbr_81 6 6 0.000000000000024767
Simmondsia chinensis GWHAASQ00000014 6 CH_sci_175 3 3 0.000000913446
Sechium edule LG01 6 CH_sed_105 4 4 0.00000000259286
Solanum pennellii Spenn-ch02 6 CH_spe_288 4 9 0.000000128749
Selenicereus undatus Scaffold_33677 6 CH_sun_220 3 7 0.00010077
Trochodendron aralioides group0 6 CH_tar_415 4 22 0.00000859422
Theobroma cacao Chromosome_3 6 CH_tca_113 6 11 0.000000000000269756
Tarenaya hassleriana NW_010966881.1 6 CH_tha_158 3 5 0.00000409681
Trifolium pratense Tp57577_TGAC_v2_LG4 6 CH_tpr_61 5 5 0.00000000000073967
Tripterygium wilfordii NC_052246.1 6 CH_twi_305 3 4 0.0000152127
Tripterygium wilfordii NC_052251.1 6 CH_twi_365 3 6 0.0000760114
Vaccinium macrocarpon chr12_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_331 3 3 0.0000072536
Vigna mungo CM024070.1 6 CH_vmu_130 4 4 0.0000000192233
Vigna mungo CM024077.1 6 CH_vmu_7 13 41 9.51008e-27
Vitis vinifera chr17 6 CH_vvi_196 4 4 0.00000000180229
Zea mays 3 6 CH_zma_55 5 9 0.00000000000162711

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001