Functional clusters
Information
- Type InterPro
- Description Wax synthase domain
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr2 | 5 | CH_acertr_410 | 3 | 3 | 0.0000041748 |
| Acer truncatum | chr11 | 5 | CH_acertr_663 | 3 | 6 | 0.0000834012 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_6 | 5 | CH_amhyb_94 | 3 | 3 | 0.0000000425145 |
| Aquilegia oxysepala | CHR01 | 5 | CH_aox_290 | 3 | 4 | 0.0000262309 |
| Aquilegia oxysepala | CHR02 | 5 | CH_aox_510 | 3 | 9 | 0.000549581 |
| Brassica carinata | ChrB05 | 5 | CH_bca_42 | 7 | 9 | 1.15518e-18 |
| Brassica napus | A02 | 5 | CH_bna_240 | 4 | 4 | 0.000000000392833 |
| Brassica napus | C03 | 5 | CH_bna_761 | 3 | 4 | 0.000006771 |
| Brassica oleracea | C3 | 5 | CH_bol_159 | 4 | 7 | 0.00000000366897 |
| Brassica rapa | A02 | 5 | CH_bra_33 | 5 | 5 | 0.000000000000032794 |
| Cannabis sativa | NC_044372.1 | 5 | CH_cansat_60 | 5 | 6 | 0.00000000000010542 |
| Citrullus lanatus | CG_Chr10 | 5 | CH_cla_125 | 3 | 3 | 0.000000661086 |
| Citrullus lanatus | CG_Chr09 | 5 | CH_cla_45 | 4 | 4 | 0.000000000146628 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2715 | 5 | CH_cqu_576 | 3 | 8 | 0.0000158312 |
| Capsella rubella | scaffold_8 | 5 | CH_cru_23 | 7 | 7 | 1.44452e-21 |
| Cucumis sativus L. | chr3 | 5 | CH_csa_120 | 4 | 6 | 0.00000000329716 |
| Cucumis sativus L. | chr7 | 5 | CH_csa_129 | 5 | 29 | 0.0000000054269 |
| Erigeron canadensis | Conyza_canadensis_scaffold:8 | 5 | CH_eca_203 | 3 | 4 | 0.0000000120811 |
| Eucalyptus grandis | Chr04 | 5 | CH_egr_475 | 5 | 11 | 0.000000000121916 |
| Eucalyptus grandis | Chr05 | 5 | CH_egr_725 | 4 | 10 | 0.000000172124 |
| Fragaria vesca | Fvb3 | 5 | CH_fve_350 | 3 | 3 | 0.000000291523 |
| Gossypium hirsutum | D05 | 5 | CH_ghi_275 | 4 | 4 | 0.0000000000779617 |
| Gossypium raimondii | Chr09 | 5 | CH_gra_296 | 3 | 4 | 0.000000603513 |
| Lonicera japonica | GWHAAZE00000001 | 5 | CH_lonja_519 | 3 | 3 | 0.000000887686 |
| Lactuca sativa | Lsat_1_v8_lg_4 | 5 | CH_lsa_137 | 5 | 7 | 0.00000000000141459 |
| Magnolia biondii | Chr16 | 5 | CH_mbi_180 | 4 | 8 | 0.0000000000240551 |
| Manihot esculenta | Chromosome07 | 5 | CH_mes_221 | 4 | 4 | 0.00000000162583 |
| Nicotiana tabacum | Nitab4.5_0000143 | 5 | CH_nta_327 | 2 | 2 | 0.000658364 |
| Nicotiana tabacum | Nitab4.5_0001198 | 5 | CH_nta_328 | 2 | 2 | 0.000658364 |
| Olea europaea | chr6 | 5 | CH_oeu_683 | 2 | 2 | 0.000800683 |
| Petunia axillaris | Peaxi162Scf00235 | 5 | CH_pax_224 | 3 | 4 | 0.000000296979 |
| Punica granatum | NC_045127.1 | 5 | CH_pgr_132 | 4 | 4 | 0.00000000026619 |
| Papaver somniferum | NC_039361.1 | 5 | CH_pso_343 | 4 | 7 | 0.00000000367277 |
| Quercus lobata | 5 | 5 | CH_qlo_1790 | 2 | 2 | 0.000774433 |
| Rhododendron simsii | chr13 | 5 | CH_rsi_527 | 3 | 3 | 0.00000349805 |
| Rhododendron simsii | chr06 | 5 | CH_rsi_528 | 3 | 3 | 0.00000349805 |
| Salvia bowleyana | GWHASIU00000004 | 5 | CH_sbo_266 | 3 | 3 | 0.0000000310517 |
| Sechium edule | LG05 | 5 | CH_sed_79 | 4 | 4 | 0.000000000137269 |
| Solanum lycopersicum | SL4.0ch11 | 5 | CH_sly_48 | 7 | 7 | 1.06297e-21 |
| Solanum pennellii | Spenn-ch11 | 5 | CH_spe_105 | 4 | 4 | 0.00000000000924027 |
| Solanum pennellii | Spenn-ch07 | 5 | CH_spe_914 | 2 | 2 | 0.00093406 |
| Solanum tuberosum | ST4.03ch11 | 5 | CH_stu_105 | 5 | 5 | 0.00000000000000289688 |
| Trochodendron aralioides | group6 | 5 | CH_tar_19 | 7 | 7 | 2.92192e-21 |
| Theobroma cacao | Chromosome_7 | 5 | CH_tca_102 | 6 | 12 | 0.0000000000000750867 |
| Theobroma cacao | Chromosome_4 | 5 | CH_tca_440 | 3 | 4 | 0.00000920191 |
| Tripterygium wilfordii | NC_052250.1 | 5 | CH_twi_224 | 3 | 3 | 0.00000133343 |
| Utricularia gibba | unitig_8 | 5 | CH_ugi_67 | 3 | 5 | 0.00000100961 |
| Vitis vinifera | chr19 | 5 | CH_vvi_621 | 2 | 2 | 0.000228189 |
| Acer truncatum | chr2 | 6 | CH_acertr_410 | 3 | 3 | 0.0000041748 |
| Acer truncatum | chr11 | 6 | CH_acertr_663 | 3 | 6 | 0.0000834012 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_6 | 6 | CH_amhyb_94 | 3 | 3 | 0.0000000425145 |
| Aquilegia oxysepala | CHR01 | 6 | CH_aox_290 | 3 | 4 | 0.0000262309 |
| Aquilegia oxysepala | CHR02 | 6 | CH_aox_510 | 3 | 9 | 0.000549581 |
| Brassica carinata | ChrB05 | 6 | CH_bca_42 | 7 | 9 | 1.15518e-18 |
| Brassica napus | A02 | 6 | CH_bna_240 | 4 | 4 | 0.000000000392833 |
| Brassica napus | C03 | 6 | CH_bna_761 | 3 | 4 | 0.000006771 |
| Brassica oleracea | C3 | 6 | CH_bol_159 | 4 | 7 | 0.00000000366897 |
| Brassica rapa | A02 | 6 | CH_bra_33 | 5 | 5 | 0.000000000000032794 |
| Cannabis sativa | NC_044372.1 | 6 | CH_cansat_60 | 5 | 6 | 0.00000000000010542 |
| Citrullus lanatus | CG_Chr10 | 6 | CH_cla_125 | 3 | 3 | 0.000000661086 |
| Citrullus lanatus | CG_Chr09 | 6 | CH_cla_45 | 4 | 4 | 0.000000000146628 |
| Cucumis melo | chr01 | 6 | CH_cme_122 | 4 | 8 | 0.00000000436227 |
| Cucumis melo | chr04 | 6 | CH_cme_89 | 4 | 4 | 0.0000000000623531 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2715 | 6 | CH_cqu_576 | 3 | 8 | 0.0000158312 |
| Capsella rubella | scaffold_8 | 6 | CH_cru_23 | 7 | 7 | 1.44452e-21 |
| Cucumis sativus L. | chr3 | 6 | CH_csa_120 | 4 | 6 | 0.00000000329716 |
| Cucumis sativus L. | chr7 | 6 | CH_csa_129 | 5 | 29 | 0.0000000054269 |
| Erigeron canadensis | Conyza_canadensis_scaffold:8 | 6 | CH_eca_203 | 3 | 4 | 0.0000000120811 |
| Eucalyptus grandis | Chr04 | 6 | CH_egr_475 | 5 | 11 | 0.000000000121916 |
| Eucalyptus grandis | Chr05 | 6 | CH_egr_725 | 4 | 10 | 0.000000172124 |
| Fragaria vesca | Fvb3 | 6 | CH_fve_350 | 3 | 3 | 0.000000291523 |
| Gossypium hirsutum | D05 | 6 | CH_ghi_275 | 4 | 4 | 0.0000000000779617 |
| Gossypium raimondii | Chr09 | 6 | CH_gra_296 | 3 | 4 | 0.000000603513 |
| Lonicera japonica | GWHAAZE00000001 | 6 | CH_lonja_519 | 3 | 3 | 0.000000887686 |
| Lactuca sativa | Lsat_1_v8_lg_4 | 6 | CH_lsa_137 | 5 | 7 | 0.00000000000141459 |
| Magnolia biondii | Chr16 | 6 | CH_mbi_180 | 4 | 8 | 0.0000000000240551 |
| Manihot esculenta | Chromosome07 | 6 | CH_mes_221 | 4 | 4 | 0.00000000162583 |
| Nicotiana tabacum | Nitab4.5_0000143 | 6 | CH_nta_327 | 2 | 2 | 0.000658364 |
| Nicotiana tabacum | Nitab4.5_0001198 | 6 | CH_nta_328 | 2 | 2 | 0.000658364 |
| Olea europaea | chr6 | 6 | CH_oeu_683 | 2 | 2 | 0.000800683 |
| Petunia axillaris | Peaxi162Scf00235 | 6 | CH_pax_224 | 3 | 4 | 0.000000296979 |
| Punica granatum | NC_045127.1 | 6 | CH_pgr_132 | 4 | 4 | 0.00000000026619 |
| Papaver somniferum | NC_039361.1 | 6 | CH_pso_343 | 4 | 7 | 0.00000000367277 |
| Quercus lobata | 5 | 6 | CH_qlo_1790 | 2 | 2 | 0.000774433 |
| Rhododendron simsii | chr13 | 6 | CH_rsi_527 | 3 | 3 | 0.00000349805 |
| Rhododendron simsii | chr06 | 6 | CH_rsi_528 | 3 | 3 | 0.00000349805 |
| Salvia bowleyana | GWHASIU00000004 | 6 | CH_sbo_266 | 3 | 3 | 0.0000000310517 |
| Sechium edule | LG05 | 6 | CH_sed_79 | 4 | 4 | 0.000000000137269 |
| Solanum lycopersicum | SL4.0ch11 | 6 | CH_sly_48 | 7 | 7 | 1.06297e-21 |
| Solanum pennellii | Spenn-ch11 | 6 | CH_spe_105 | 4 | 4 | 0.00000000000924027 |
| Solanum pennellii | Spenn-ch07 | 6 | CH_spe_914 | 2 | 2 | 0.00093406 |
| Solanum tuberosum | ST4.03ch11 | 6 | CH_stu_105 | 5 | 5 | 0.00000000000000289688 |
| Trochodendron aralioides | group6 | 6 | CH_tar_19 | 7 | 7 | 2.92192e-21 |
| Theobroma cacao | Chromosome_7 | 6 | CH_tca_102 | 6 | 12 | 0.0000000000000750867 |
| Theobroma cacao | Chromosome_4 | 6 | CH_tca_440 | 3 | 4 | 0.00000920191 |
| Tripterygium wilfordii | NC_052250.1 | 6 | CH_twi_224 | 3 | 3 | 0.00000133343 |
| Utricularia gibba | unitig_8 | 6 | CH_ugi_67 | 3 | 5 | 0.00000100961 |
| Vitis vinifera | chr19 | 6 | CH_vvi_621 | 2 | 2 | 0.000228189 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |