Functional clusters
Information
- Type InterPro
- Description Argonaute linker 2 domain
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Brassica napus | A10 | 5 | CH_bna_1185 | 3 | 12 | 0.000229802 |
| Brassica napus | C09 | 5 | CH_bna_1335 | 3 | 15 | 0.000475051 |
| Brassica rapa | A10 | 5 | CH_bra_497 | 3 | 13 | 0.000359 |
| Chenopodium quinoa | C_Quinoa_Scaffold_4077 | 5 | CH_cqu_337 | 4 | 10 | 0.000000159253 |
| Daucus carota | DCARv2_Chr6 | 5 | CH_dca_377 | 3 | 6 | 0.0000348725 |
| Daucus carota | DCARv2_Chr8 | 5 | CH_dca_461 | 3 | 8 | 0.0000975902 |
| Durio zibethinus | NW_019168159.1 | 5 | CH_dzi_200 | 4 | 11 | 0.000000179105 |
| Lotus japonicus | chr5 | 5 | CH_lja_320 | 3 | 4 | 0.00000877217 |
| Lactuca sativa | Lsat_1_v8_lg_2 | 5 | CH_lsa_406 | 3 | 3 | 0.000000653919 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 5 | CH_rch_793 | 3 | 4 | 0.00000347033 |
| Rhododendron simsii | chr01 | 5 | CH_rsi_827 | 3 | 13 | 0.000213949 |
| Trochodendron aralioides | group13 | 5 | CH_tar_381 | 3 | 3 | 0.00000302778 |
| Brassica napus | A10 | 6 | CH_bna_1185 | 3 | 12 | 0.000229802 |
| Brassica napus | C09 | 6 | CH_bna_1335 | 3 | 15 | 0.000475051 |
| Brassica rapa | A10 | 6 | CH_bra_497 | 3 | 13 | 0.000359 |
| Chenopodium quinoa | C_Quinoa_Scaffold_4077 | 6 | CH_cqu_337 | 4 | 10 | 0.000000159253 |
| Daucus carota | DCARv2_Chr6 | 6 | CH_dca_377 | 3 | 6 | 0.0000348725 |
| Daucus carota | DCARv2_Chr8 | 6 | CH_dca_461 | 3 | 8 | 0.0000975902 |
| Durio zibethinus | NW_019168159.1 | 6 | CH_dzi_200 | 4 | 11 | 0.000000179105 |
| Lotus japonicus | chr5 | 6 | CH_lja_320 | 3 | 4 | 0.00000877217 |
| Lactuca sativa | Lsat_1_v8_lg_2 | 6 | CH_lsa_406 | 3 | 3 | 0.000000653919 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 6 | CH_rch_793 | 3 | 4 | 0.00000347033 |
| Rhododendron simsii | chr01 | 6 | CH_rsi_827 | 3 | 13 | 0.000213949 |
| Trochodendron aralioides | group13 | 6 | CH_tar_381 | 3 | 3 | 0.00000302778 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |