Functional clusters
Information
- Type InterPro
- Description Histone H2A, C-terminal domain
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.13 | 5 | CH_arhy_1135 | 3 | 11 | 0.000448101 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.03 | 5 | CH_arhy_1136 | 3 | 11 | 0.000448101 |
| Lactuca sativa | Lsat_1_v8_lg_5 | 5 | CH_lsa_266 | 5 | 12 | 0.00000000588647 |
| Lactuca sativa | Lsat_1_v8_lg_8 | 5 | CH_lsa_628 | 3 | 4 | 0.0000643263 |
| Medicago truncatula | chr2 | 5 | CH_mtr_890 | 3 | 4 | 0.0000331682 |
| Papaver somniferum | NW_020651082.1 | 5 | CH_pso_1146 | 3 | 6 | 0.000469185 |
| Papaver somniferum | NW_020628818.1 | 5 | CH_pso_199 | 6 | 11 | 0.0000000000024361 |
| Papaver somniferum | NC_039358.1 | 5 | CH_pso_309 | 5 | 9 | 0.00000000111337 |
| Papaver somniferum | NC_039360.1 | 5 | CH_pso_388 | 4 | 4 | 0.0000000145554 |
| Sequoiadendron giganteum | chr6 | 5 | CH_sgi_134 | 9 | 9 | 2.35986e-24 |
| Sequoiadendron giganteum | chr2 | 5 | CH_sgi_949 | 4 | 4 | 0.0000000160856 |
| Zea mays | 10 | 5 | CH_zma_144 | 4 | 4 | 0.0000000264883 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.13 | 6 | CH_arhy_1135 | 3 | 11 | 0.000448101 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.03 | 6 | CH_arhy_1136 | 3 | 11 | 0.000448101 |
| Lactuca sativa | Lsat_1_v8_lg_5 | 6 | CH_lsa_266 | 5 | 12 | 0.00000000588647 |
| Lactuca sativa | Lsat_1_v8_lg_8 | 6 | CH_lsa_628 | 3 | 4 | 0.0000643263 |
| Medicago truncatula | chr2 | 6 | CH_mtr_890 | 3 | 4 | 0.0000331682 |
| Papaver somniferum | NW_020651082.1 | 6 | CH_pso_1146 | 3 | 6 | 0.000469185 |
| Papaver somniferum | NW_020628818.1 | 6 | CH_pso_199 | 6 | 11 | 0.0000000000024361 |
| Papaver somniferum | NC_039358.1 | 6 | CH_pso_309 | 5 | 9 | 0.00000000111337 |
| Papaver somniferum | NC_039360.1 | 6 | CH_pso_388 | 4 | 4 | 0.0000000145554 |
| Sequoiadendron giganteum | chr6 | 6 | CH_sgi_134 | 9 | 9 | 2.35986e-24 |
| Sequoiadendron giganteum | chr2 | 6 | CH_sgi_949 | 4 | 4 | 0.0000000160856 |
| Zea mays | 10 | 6 | CH_zma_144 | 4 | 4 | 0.0000000264883 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |