Functional clusters

Information

  • Type InterPro
  • Description Atypical Arm repeat

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-7 5 CH_aar_407 4 51 0.00055904
Arabidopsis lyrata scaffold_8 5 CH_aly_279 3 3 0.000000784211
Cicer arietinum L. Ca_LG3_v3 5 CH_car_49 5 37 0.000000015037
Cardamine hirsuta Chr6 5 CH_chi_364 3 4 0.00000343927
Capsella rubella scaffold_8 5 CH_cru_92 5 5 0.000000000000429198
Eucalyptus grandis Chr02 5 CH_egr_860 3 5 0.000001798
Manihot esculenta Chromosome01 5 CH_mes_326 3 3 0.000000469831
Medicago truncatula chr4 5 CH_mtr_300 5 10 0.0000000000332938
Physcomitrium patens Chr02 5 CH_ppa_381 2 2 0.000612726
Sequoiadendron giganteum chr8 5 CH_sgi_107 8 8 9.23406e-27
Vigna mungo CM024070.1 5 CH_vmu_405 3 21 0.000166272
Aethionema arabicum LG-7 6 CH_aar_407 4 51 0.00055904
Arabidopsis lyrata scaffold_8 6 CH_aly_279 3 3 0.000000784211
Cicer arietinum L. Ca_LG3_v3 6 CH_car_49 5 37 0.000000015037
Cardamine hirsuta Chr6 6 CH_chi_364 3 4 0.00000343927
Capsella rubella scaffold_8 6 CH_cru_92 5 5 0.000000000000429198
Eucalyptus grandis Chr02 6 CH_egr_860 3 5 0.000001798
Manihot esculenta Chromosome01 6 CH_mes_326 3 3 0.000000469831
Medicago truncatula chr4 6 CH_mtr_300 5 10 0.0000000000332938
Physcomitrium patens Chr02 6 CH_ppa_381 2 2 0.000612726
Sequoiadendron giganteum chr8 6 CH_sgi_107 8 8 9.23406e-27
Vigna mungo CM024070.1 6 CH_vmu_405 3 21 0.000166272

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001