Functional clusters

Information

  • Type InterPro
  • Description Protein BONZAI

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr2 5 CH_acertr_14 8 11 4.05011e-24
Actinidia chinensis Lachesis_group7 5 CH_ach_322 2 2 0.000162964
Aquilegia oxysepala CHR02 5 CH_aox_410 2 2 0.000240597
Brassica carinata ChrC07 5 CH_bca_2124 2 2 0.000961939
Camellia sinensis var. sinensis Chr3 5 CH_camsi_225 5 21 0.0000000000141578
Capsicum annuum PGAv.1.6.scaffold305 5 CH_can_273 3 3 0.0000000409487
Carya illinoinensis Chr08 5 CH_cil_15 15 77 1.3398e-32
Daucus carota DCARv2_Chr6 5 CH_dca_401 2 2 0.0000637775
Erigeron canadensis Conyza_canadensis_scaffold:2 5 CH_eca_521 2 2 0.0000448722
Glycine max Gm03 5 CH_gma_716 2 2 0.000227734
Helianthus annuus HanXRQChr15 5 CH_han_354 3 3 0.0000000089598
Lonicera japonica GWHAAZE00000007 5 CH_lonja_898 2 2 0.000179662
Medicago truncatula chr7 5 CH_mtr_1242 2 3 0.000369764
Pisum sativum chr3LG5 5 CH_psa_431 2 2 0.0000521635
Phaseolus vulgaris Chr06 5 CH_pvu_436 2 2 0.0000734727
Quercus lobata 3 5 CH_qlo_831 4 19 0.000000201255
Rosa chinensis RcHm_v2.0_Chr3 5 CH_rch_376 4 8 0.000000000465564
Sechium edule LG11 5 CH_sed_128 4 30 0.0000000298284
Solanum lycopersicum SL4.0ch10 5 CH_sly_130 4 4 0.000000000000606655
Trochodendron aralioides group17 5 CH_tar_637 2 2 0.00018011
Trifolium pratense Tp57577_TGAC_v2_LG6 5 CH_tpr_190 3 3 0.0000000343818
Vaccinium macrocarpon chr5_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_566 2 2 0.000278772
Vitis vinifera chr14 5 CH_vvi_127 5 10 0.00000000000132817
Acer truncatum chr2 6 CH_acertr_14 8 11 4.05011e-24
Actinidia chinensis Lachesis_group7 6 CH_ach_322 2 2 0.000162964
Aquilegia oxysepala CHR02 6 CH_aox_410 2 2 0.000240597
Brassica carinata ChrC07 6 CH_bca_2124 2 2 0.000961939
Camellia sinensis var. sinensis Chr3 6 CH_camsi_225 5 21 0.0000000000141578
Capsicum annuum PGAv.1.6.scaffold305 6 CH_can_273 3 3 0.0000000409487
Carya illinoinensis Chr08 6 CH_cil_15 15 77 1.3398e-32
Daucus carota DCARv2_Chr6 6 CH_dca_401 2 2 0.0000637775
Erigeron canadensis Conyza_canadensis_scaffold:2 6 CH_eca_521 2 2 0.0000448722
Glycine max Gm03 6 CH_gma_716 2 2 0.000227734
Helianthus annuus HanXRQChr15 6 CH_han_354 3 3 0.0000000089598
Lonicera japonica GWHAAZE00000007 6 CH_lonja_898 2 2 0.000179662
Medicago truncatula chr7 6 CH_mtr_1242 2 3 0.000369764
Pisum sativum chr3LG5 6 CH_psa_431 2 2 0.0000521635
Phaseolus vulgaris Chr06 6 CH_pvu_436 2 2 0.0000734727
Quercus lobata 3 6 CH_qlo_831 4 19 0.000000201255
Rosa chinensis RcHm_v2.0_Chr3 6 CH_rch_376 4 8 0.000000000465564
Sechium edule LG11 6 CH_sed_128 4 30 0.0000000298284
Solanum lycopersicum SL4.0ch10 6 CH_sly_130 4 4 0.000000000000606655
Trochodendron aralioides group17 6 CH_tar_637 2 2 0.00018011
Trifolium pratense Tp57577_TGAC_v2_LG6 6 CH_tpr_190 3 3 0.0000000343818
Vaccinium macrocarpon chr5_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_566 2 2 0.000278772
Vitis vinifera chr14 6 CH_vvi_127 5 10 0.00000000000132817

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001