Functional clusters

Information

  • Type InterPro
  • Description Small heat shock protein HSP20

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr7 5 CH_acertr_466 3 3 0.0000150889
Acer truncatum chr12 5 CH_acertr_467 3 3 0.0000150889
Acer truncatum chr2 5 CH_acertr_528 3 4 0.0000603201
Arabidopsis lyrata scaffold_5 5 CH_aly_250 4 9 0.000000331971
Amaranthus hybridus AmaHy_arrow1_Scaffold_8 5 CH_amhyb_171 3 3 0.00000722746
Aquilegia oxysepala CHR07 5 CH_aox_116 4 4 0.0000000164456
Aquilegia oxysepala CHR07 5 CH_aox_161 4 6 0.000000246347
Amborella trichopoda AmTr_v1.0_scaffold00165 5 CH_atr_272 5 32 0.00000155881
Amborella trichopoda AmTr_v1.0_scaffold00146 5 CH_atr_86 5 5 0.00000000000786782
Beta vulgaris Chr2_EL10_PGA_scaffold6 5 CH_bvu_379 3 6 0.000115006
Camellia sinensis var. sinensis Chr11 5 CH_camsi_103 7 12 9.03157e-16
Camellia sinensis var. sinensis Chr1 5 CH_camsi_67 9 25 5.63327e-19
Cannabis sativa NC_044375.1 5 CH_cansat_35 7 8 1.2381e-17
Capsicum annuum PGAv.1.6.scaffold606 5 CH_can_254 4 4 0.0000000179742
Capsicum annuum PGAv.1.6.scaffold394 5 CH_can_472 3 3 0.00002072
Cicer arietinum L. Ca_LG6_v3 5 CH_car_42 4 4 0.00000000432849
Corylus avellana 11 5 CH_cav_275 4 8 0.000000690757
Chara braunii BFEA01000721 5 CH_cbr_24 5 6 0.00000000000526012
Chara braunii BFEA01000698 5 CH_cbr_25 5 6 0.00000000000526012
Coffea canephora chr2 5 CH_ccan_88 4 12 0.000000000444541
Citrus clementina scaffold_5 5 CH_ccl_152 6 8 0.0000000000142338
Citrus clementina scaffold_8 5 CH_ccl_238 5 7 0.00000000684828
Citrus clementina scaffold_9 5 CH_ccl_292 5 10 0.0000000818494
Citrus clementina scaffold_1 5 CH_ccl_581 3 3 0.000124571
Carpinus fangiana Cfa04 5 CH_cfa_18 13 28 6.98383e-28
Carpinus fangiana Cfa07 5 CH_cfa_454 3 4 0.000170555
Carya illinoinensis Chr13 5 CH_cil_14 14 20 2.89002e-33
Carya illinoinensis Chr14 5 CH_cil_551 3 3 0.0000614334
Carya illinoinensis Chr15 5 CH_cil_63 8 8 1.05856e-19
Corchorus olitorius AWUE01017564.1 5 CH_col_105 3 3 0.0000281603
Corchorus olitorius AWUE01016544.1 5 CH_col_48 5 8 0.00000000241642
Carica papaya supercontig_81 5 CH_cpa_7 10 21 2.91875e-22
Cucumis sativus L. chr1 5 CH_csa_273 3 3 0.0000101287
Cucumis sativus L. chr5 5 CH_csa_47 7 11 4.42484e-16
Davidia involucrata GWHABJS00000701 5 CH_din_74 6 6 0.00000000000000779928
Davidia involucrata GWHABJS00000701 5 CH_din_75 6 6 0.00000000000000779928
Davidia involucrata GWHABJS00000009 5 CH_din_788 3 7 0.000714793
Durio zibethinus NW_019167871.1 5 CH_dzi_143 5 10 0.00000000500543
Durio zibethinus NW_019167882.1 5 CH_dzi_29 10 24 5.05079e-21
Durio zibethinus NW_019168159.1 5 CH_dzi_353 3 3 0.0000294495
Erigeron canadensis Conyza_canadensis_scaffold:6 5 CH_eca_157 4 4 0.00000000105067
Erigeron canadensis Conyza_canadensis_scaffold:5 5 CH_eca_66 5 5 0.000000000000353619
Eucalyptus grandis Chr10 5 CH_egr_19 18 26 8.78472e-47
Erythranthe guttata scaffold_6 5 CH_egut_29 15 57 6.10111e-29
Fragaria vesca Fvb3 5 CH_fve_592 3 7 0.000123729
Gossypium hirsutum A07 5 CH_ghi_751 4 13 0.0000257945
Gossypium hirsutum D07 5 CH_ghi_752 4 13 0.0000257945
Glycine max Gm07 5 CH_gma_100 6 7 0.000000000000223317
Glycine max Gm13 5 CH_gma_238 5 9 0.00000000459395
Glycine max Gm08 5 CH_gma_694 3 4 0.000179884
Gossypium raimondii Chr01 5 CH_gra_336 6 77 0.0000036513
Helianthus annuus HanXRQChr04 5 CH_han_163 7 25 0.000000000000534212
Helianthus annuus HanXRQChr03 5 CH_han_243 5 7 0.0000000000832843
Helianthus annuus HanXRQChr01 5 CH_han_309 5 11 0.00000000182881
Hydrangea macrophylla Hma1.2p1_0196F.1 5 CH_hma_56 5 9 0.000000000184952
Lotus japonicus chr5 5 CH_lja_173 4 6 0.0000000796496
Lonicera japonica GWHAAZE00000002 5 CH_lonja_334 5 9 0.00000000287706
Lonicera japonica GWHAAZE00000007 5 CH_lonja_396 4 4 0.0000000263695
Lonicera japonica GWHAAZE00000001 5 CH_lonja_459 5 18 0.000000194361
Lactuca sativa Lsat_1_v8_lg_7 5 CH_lsa_108 6 7 0.0000000000000415939
Lactuca sativa Lsat_1_v8_lg_2 5 CH_lsa_200 5 7 0.000000000186611
Lactuca sativa Lsat_1_v8_lg_2 5 CH_lsa_631 3 4 0.0000712171
Magnolia biondii Chr06 5 CH_mbi_1234 3 9 0.000770665
Magnolia biondii Chr05 5 CH_mbi_636 3 3 0.00000919902
Malus domestica Chr08 5 CH_mdo_147 6 9 0.000000000000482831
Malus domestica Chr07 5 CH_mdo_435 4 5 0.0000000672455
Malus domestica Chr11 5 CH_mdo_519 5 24 0.000000375591
Malus domestica Chr15 5 CH_mdo_893 3 4 0.0000788117
Manihot esculenta Chromosome02 5 CH_mes_155 6 8 0.00000000000376897
Manihot esculenta Chromosome14 5 CH_mes_50 10 11 2.28361e-24
Marchantia polymorpha scaffold_10 5 CH_mpo_35 5 5 0.0000000000734245
Marchantia polymorpha scaffold_76 5 CH_mpo_36 5 5 0.0000000000734245
Medicago truncatula chr6 5 CH_mtr_1368 3 9 0.000695121
Medicago truncatula chr1 5 CH_mtr_279 5 6 0.0000000000125991
Nelumbo nucifera chr7 5 CH_nnu_109 5 7 0.000000000369145
Nelumbo nucifera chr7 5 CH_nnu_112 5 8 0.000000000983731
Nicotiana tabacum Nitab4.5_0000278 5 CH_nta_61 4 5 0.000000014165
Oryza sativa ssp. japonica chr01 5 CH_osa_112 5 6 0.00000000000299891
Oryza sativa ssp. japonica chr03 5 CH_osa_221 4 6 0.0000000202718
Petunia axillaris Peaxi162Scf00928 5 CH_pax_338 3 3 0.0000131499
Punica granatum NC_045132.1 5 CH_pgr_27 8 9 5.93265e-20
Physcomitrium patens Chr08 5 CH_ppa_126 4 21 0.0000611586
Prunus persica Pp01 5 CH_ppe_499 3 3 0.0000128547
Prunus persica Pp06 5 CH_ppe_94 7 8 1.85137e-17
Pisum sativum chr7LG7 5 CH_psa_118 7 37 0.000000000297611
Pisum sativum chr2LG1 5 CH_psa_243 4 5 0.00000019444
Pisum sativum chr6LG2 5 CH_psa_385 4 12 0.0000191451
Pisum sativum chr5LG3 5 CH_psa_406 3 3 0.0000403267
Papaver somniferum NC_039366.1 5 CH_pso_1160 3 6 0.000494307
Papaver somniferum NC_039368.1 5 CH_pso_474 5 19 0.000000111677
Papaver somniferum NW_020628818.1 5 CH_pso_648 4 10 0.00000326899
Phaseolus vulgaris Chr08 5 CH_pvu_384 3 3 0.0000186246
Phaseolus vulgaris Chr02 5 CH_pvu_79 6 6 0.00000000000000853474
Quercus lobata 11 5 CH_qlo_230 8 11 2.28652e-17
Quercus lobata 8 5 CH_qlo_418 6 8 0.00000000000322621
Quercus lobata 1 5 CH_qlo_55 12 13 1.94995e-30
Rosa chinensis RcHm_v2.0_Chr5 5 CH_rch_1030 3 5 0.0000547916
Rosa chinensis RcHm_v2.0_Chr1 5 CH_rch_1356 3 9 0.000459607
Rosa chinensis RcHm_v2.0_Chr5 5 CH_rch_688 4 11 0.00000079151
Rosa chinensis RcHm_v2.0_Chr6 5 CH_rch_822 3 3 0.00000548298
Salvia bowleyana GWHASIU00000002 5 CH_sbo_36 11 20 3.20109e-26
Salix brachista GWHAAZH00000007 5 CH_sbr_415 3 3 0.0000241827
Salix brachista GWHAAZH00000009 5 CH_sbr_416 3 3 0.0000241827
Salix brachista GWHAAZH00000019 5 CH_sbr_96 6 8 0.000000000000371272
Simmondsia chinensis GWHAASQ00000010 5 CH_sci_41 6 8 0.000000000000109185
Sechium edule LG04 5 CH_sed_293 3 5 0.0000347135
Sequoiadendron giganteum chr3 5 CH_sgi_1112 5 7 0.000000175522
Sequoiadendron giganteum chr10 5 CH_sgi_1113 5 7 0.000000175522
Sequoiadendron giganteum chr2 5 CH_sgi_148 13 23 2.97924e-23
Sequoiadendron giganteum chr5 5 CH_sgi_24 21 27 1.37416e-44
Solanum lycopersicum SL4.0ch06 5 CH_sly_260 4 5 0.0000000181464
Solanum pennellii Spenn-ch06 5 CH_spe_102 5 6 0.00000000000592529
Solanum tuberosum ST4.03ch09 5 CH_stu_120 6 7 0.0000000000000330402
Solanum tuberosum ST4.03ch06 5 CH_stu_186 5 6 0.0000000000442063
Trochodendron aralioides group2 5 CH_tar_38 7 8 7.2324e-18
Theobroma cacao Chromosome_9 5 CH_tca_126 6 10 0.00000000000100315
Theobroma cacao Chromosome_9 5 CH_tca_452 3 3 0.0000142497
Trifolium pratense Tp57577_TGAC_v2_scaf_259 5 CH_tpr_294 4 10 0.00000199217
Tripterygium wilfordii NC_052233.1 5 CH_twi_195 4 7 0.000000318822
Vaccinium macrocarpon chr7_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_52 6 6 0.00000000000000193019
Vigna mungo CM024069.1 5 CH_vmu_256 3 3 0.00000713945
Vitis vinifera chr13 5 CH_vvi_26 13 26 7.06078e-29
Vitis vinifera chr4 5 CH_vvi_59 8 9 2.44426e-19
Zea mays 9 5 CH_zma_357 3 5 0.0000793075
Zea mays 1 5 CH_zma_406 3 6 0.000158547
Zea mays 3 5 CH_zma_96 5 10 0.000000000547987
Acer truncatum chr7 6 CH_acertr_466 3 3 0.0000150889
Acer truncatum chr12 6 CH_acertr_467 3 3 0.0000150889
Acer truncatum chr2 6 CH_acertr_528 3 4 0.0000603201
Arabidopsis lyrata scaffold_5 6 CH_aly_250 4 9 0.000000331971
Amaranthus hybridus AmaHy_arrow1_Scaffold_8 6 CH_amhyb_171 3 3 0.00000722746
Aquilegia oxysepala CHR07 6 CH_aox_116 4 4 0.0000000164456
Aquilegia oxysepala CHR07 6 CH_aox_161 4 6 0.000000246347
Amborella trichopoda AmTr_v1.0_scaffold00165 6 CH_atr_272 5 32 0.00000155881
Amborella trichopoda AmTr_v1.0_scaffold00146 6 CH_atr_86 5 5 0.00000000000786782
Beta vulgaris Chr2_EL10_PGA_scaffold6 6 CH_bvu_379 3 6 0.000115006
Camellia sinensis var. sinensis Chr11 6 CH_camsi_103 7 12 9.03157e-16
Camellia sinensis var. sinensis Chr1 6 CH_camsi_67 9 25 5.63327e-19
Cannabis sativa NC_044375.1 6 CH_cansat_35 7 8 1.2381e-17
Capsicum annuum PGAv.1.6.scaffold606 6 CH_can_254 4 4 0.0000000179742
Capsicum annuum PGAv.1.6.scaffold394 6 CH_can_472 3 3 0.00002072
Cicer arietinum L. Ca_LG6_v3 6 CH_car_42 4 4 0.00000000432849
Corylus avellana 11 6 CH_cav_275 4 8 0.000000690757
Chara braunii BFEA01000721 6 CH_cbr_24 5 6 0.00000000000526012
Chara braunii BFEA01000698 6 CH_cbr_25 5 6 0.00000000000526012
Coffea canephora chr2 6 CH_ccan_88 4 12 0.000000000444541
Citrus clementina scaffold_5 6 CH_ccl_152 6 8 0.0000000000142338
Citrus clementina scaffold_8 6 CH_ccl_238 5 7 0.00000000684828
Citrus clementina scaffold_9 6 CH_ccl_292 5 10 0.0000000818494
Citrus clementina scaffold_1 6 CH_ccl_581 3 3 0.000124571
Carpinus fangiana Cfa04 6 CH_cfa_18 13 28 6.98383e-28
Carpinus fangiana Cfa07 6 CH_cfa_454 3 4 0.000170555
Carya illinoinensis Chr13 6 CH_cil_14 14 20 2.89002e-33
Carya illinoinensis Chr14 6 CH_cil_551 3 3 0.0000614334
Carya illinoinensis Chr15 6 CH_cil_63 8 8 1.05856e-19
Cucumis melo chr10 6 CH_cme_110 6 27 0.00000000117127
Cucumis melo chr12 6 CH_cme_249 3 3 0.0000135118
Corchorus olitorius AWUE01017564.1 6 CH_col_105 3 3 0.0000281603
Corchorus olitorius AWUE01016544.1 6 CH_col_48 5 8 0.00000000241642
Carica papaya supercontig_81 6 CH_cpa_7 10 21 2.91875e-22
Cucumis sativus L. chr1 6 CH_csa_273 3 3 0.0000101287
Cucumis sativus L. chr5 6 CH_csa_47 7 11 4.42484e-16
Davidia involucrata GWHABJS00000701 6 CH_din_74 6 6 0.00000000000000779928
Davidia involucrata GWHABJS00000701 6 CH_din_75 6 6 0.00000000000000779928
Davidia involucrata GWHABJS00000009 6 CH_din_788 3 7 0.000714793
Durio zibethinus NW_019167871.1 6 CH_dzi_143 5 10 0.00000000500543
Durio zibethinus NW_019167882.1 6 CH_dzi_29 10 24 5.05079e-21
Durio zibethinus NW_019168159.1 6 CH_dzi_353 3 3 0.0000294495
Erigeron canadensis Conyza_canadensis_scaffold:6 6 CH_eca_157 4 4 0.00000000105067
Erigeron canadensis Conyza_canadensis_scaffold:5 6 CH_eca_66 5 5 0.000000000000353619
Eucalyptus grandis Chr10 6 CH_egr_19 18 26 8.78472e-47
Erythranthe guttata scaffold_6 6 CH_egut_29 15 57 6.10111e-29
Fragaria vesca Fvb3 6 CH_fve_592 3 7 0.000123729
Gossypium hirsutum A07 6 CH_ghi_751 4 13 0.0000257945
Gossypium hirsutum D07 6 CH_ghi_752 4 13 0.0000257945
Glycine max Gm07 6 CH_gma_100 6 7 0.000000000000223317
Glycine max Gm13 6 CH_gma_238 5 9 0.00000000459395
Glycine max Gm08 6 CH_gma_694 3 4 0.000179884
Gossypium raimondii Chr01 6 CH_gra_336 6 77 0.0000036513
Helianthus annuus HanXRQChr04 6 CH_han_163 7 25 0.000000000000534212
Helianthus annuus HanXRQChr03 6 CH_han_243 5 7 0.0000000000832843
Helianthus annuus HanXRQChr01 6 CH_han_309 5 11 0.00000000182881
Hydrangea macrophylla Hma1.2p1_0196F.1 6 CH_hma_56 5 9 0.000000000184952
Lotus japonicus chr5 6 CH_lja_173 4 6 0.0000000796496
Lonicera japonica GWHAAZE00000002 6 CH_lonja_334 5 9 0.00000000287706
Lonicera japonica GWHAAZE00000007 6 CH_lonja_396 4 4 0.0000000263695
Lonicera japonica GWHAAZE00000001 6 CH_lonja_459 5 18 0.000000194361
Lactuca sativa Lsat_1_v8_lg_7 6 CH_lsa_108 6 7 0.0000000000000415939
Lactuca sativa Lsat_1_v8_lg_2 6 CH_lsa_200 5 7 0.000000000186611
Lactuca sativa Lsat_1_v8_lg_2 6 CH_lsa_631 3 4 0.0000712171
Magnolia biondii Chr06 6 CH_mbi_1234 3 9 0.000770665
Magnolia biondii Chr05 6 CH_mbi_636 3 3 0.00000919902
Malus domestica Chr08 6 CH_mdo_147 6 9 0.000000000000482831
Malus domestica Chr07 6 CH_mdo_435 4 5 0.0000000672455
Malus domestica Chr11 6 CH_mdo_519 5 24 0.000000375591
Malus domestica Chr15 6 CH_mdo_893 3 4 0.0000788117
Manihot esculenta Chromosome02 6 CH_mes_155 6 8 0.00000000000376897
Manihot esculenta Chromosome14 6 CH_mes_50 10 11 2.28361e-24
Marchantia polymorpha scaffold_10 6 CH_mpo_35 5 5 0.0000000000734245
Marchantia polymorpha scaffold_76 6 CH_mpo_36 5 5 0.0000000000734245
Medicago truncatula chr6 6 CH_mtr_1368 3 9 0.000695121
Medicago truncatula chr1 6 CH_mtr_279 5 6 0.0000000000125991
Nelumbo nucifera chr7 6 CH_nnu_109 5 7 0.000000000369145
Nelumbo nucifera chr7 6 CH_nnu_112 5 8 0.000000000983731
Nicotiana tabacum Nitab4.5_0000278 6 CH_nta_61 4 5 0.000000014165
Oryza sativa ssp. japonica chr01 6 CH_osa_112 5 6 0.00000000000299891
Oryza sativa ssp. japonica chr03 6 CH_osa_221 4 6 0.0000000202718
Petunia axillaris Peaxi162Scf00928 6 CH_pax_338 3 3 0.0000131499
Punica granatum NC_045132.1 6 CH_pgr_27 8 9 5.93265e-20
Physcomitrium patens Chr08 6 CH_ppa_126 4 21 0.0000611586
Prunus persica Pp01 6 CH_ppe_499 3 3 0.0000128547
Prunus persica Pp06 6 CH_ppe_94 7 8 1.85137e-17
Pisum sativum chr7LG7 6 CH_psa_118 7 37 0.000000000297611
Pisum sativum chr2LG1 6 CH_psa_243 4 5 0.00000019444
Pisum sativum chr6LG2 6 CH_psa_385 4 12 0.0000191451
Pisum sativum chr5LG3 6 CH_psa_406 3 3 0.0000403267
Papaver somniferum NC_039366.1 6 CH_pso_1160 3 6 0.000494307
Papaver somniferum NC_039368.1 6 CH_pso_474 5 19 0.000000111677
Papaver somniferum NW_020628818.1 6 CH_pso_648 4 10 0.00000326899
Phaseolus vulgaris Chr08 6 CH_pvu_384 3 3 0.0000186246
Phaseolus vulgaris Chr02 6 CH_pvu_79 6 6 0.00000000000000853474
Quercus lobata 11 6 CH_qlo_230 8 11 2.28652e-17
Quercus lobata 8 6 CH_qlo_418 6 8 0.00000000000322621
Quercus lobata 1 6 CH_qlo_55 12 13 1.94995e-30
Rosa chinensis RcHm_v2.0_Chr5 6 CH_rch_1030 3 5 0.0000547916
Rosa chinensis RcHm_v2.0_Chr1 6 CH_rch_1356 3 9 0.000459607
Rosa chinensis RcHm_v2.0_Chr5 6 CH_rch_688 4 11 0.00000079151
Rosa chinensis RcHm_v2.0_Chr6 6 CH_rch_822 3 3 0.00000548298
Salvia bowleyana GWHASIU00000002 6 CH_sbo_36 11 20 3.20109e-26
Salix brachista GWHAAZH00000007 6 CH_sbr_415 3 3 0.0000241827
Salix brachista GWHAAZH00000009 6 CH_sbr_416 3 3 0.0000241827
Salix brachista GWHAAZH00000019 6 CH_sbr_96 6 8 0.000000000000371272
Simmondsia chinensis GWHAASQ00000010 6 CH_sci_41 6 8 0.000000000000109185
Sechium edule LG04 6 CH_sed_293 3 5 0.0000347135
Sequoiadendron giganteum chr3 6 CH_sgi_1112 5 7 0.000000175522
Sequoiadendron giganteum chr10 6 CH_sgi_1113 5 7 0.000000175522
Sequoiadendron giganteum chr2 6 CH_sgi_148 13 23 2.97924e-23
Sequoiadendron giganteum chr5 6 CH_sgi_24 21 27 1.37416e-44
Solanum lycopersicum SL4.0ch06 6 CH_sly_260 4 5 0.0000000181464
Solanum pennellii Spenn-ch06 6 CH_spe_102 5 6 0.00000000000592529
Solanum tuberosum ST4.03ch09 6 CH_stu_120 6 7 0.0000000000000330402
Solanum tuberosum ST4.03ch06 6 CH_stu_186 5 6 0.0000000000442063
Trochodendron aralioides group2 6 CH_tar_38 7 8 7.2324e-18
Theobroma cacao Chromosome_9 6 CH_tca_126 6 10 0.00000000000100315
Theobroma cacao Chromosome_9 6 CH_tca_452 3 3 0.0000142497
Trifolium pratense Tp57577_TGAC_v2_scaf_259 6 CH_tpr_294 4 10 0.00000199217
Tripterygium wilfordii NC_052233.1 6 CH_twi_195 4 7 0.000000318822
Vaccinium macrocarpon chr7_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_52 6 6 0.00000000000000193019
Vigna mungo CM024069.1 6 CH_vmu_256 3 3 0.00000713945
Vitis vinifera chr13 6 CH_vvi_26 13 26 7.06078e-29
Vitis vinifera chr4 6 CH_vvi_59 8 9 2.44426e-19
Zea mays 9 6 CH_zma_357 3 5 0.0000793075
Zea mays 1 6 CH_zma_406 3 6 0.000158547
Zea mays 3 6 CH_zma_96 5 10 0.000000000547987

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001