Functional clusters

Information

  • Type InterPro
  • Description Basic helix-loop-helix (bHLH) transcription factors ALC-like, plant

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_7 5 CH_aly_340 3 3 0.00000365965
Arabidopsis thaliana Chr4 5 CH_ath_126 4 5 0.000000000481414
Brassica carinata ChrC06 5 CH_bca_1017 3 3 0.00000786879
Brassica carinata ChrC09 5 CH_bca_1192 3 4 0.000031465
Brassica napus C01 5 CH_bna_1253 3 7 0.000312451
Camellia sinensis var. sinensis Chr11 5 CH_camsi_886 3 9 0.0000317656
Erythranthe guttata scaffold_14 5 CH_egut_525 3 8 0.0000733944
Lonicera japonica GWHAAZE00000002 5 CH_lonja_1227 2 2 0.000898311
Sequoiadendron giganteum chr6 5 CH_sgi_1805 2 2 0.0000487151
Tarenaya hassleriana NW_010966177.1 5 CH_tha_165 3 4 0.0000083695
Arabidopsis lyrata scaffold_7 6 CH_aly_340 3 3 0.00000365965
Arabidopsis thaliana Chr4 6 CH_ath_126 4 5 0.000000000481414
Brassica carinata ChrC06 6 CH_bca_1017 3 3 0.00000786879
Brassica carinata ChrC09 6 CH_bca_1192 3 4 0.000031465
Brassica napus C01 6 CH_bna_1253 3 7 0.000312451
Camellia sinensis var. sinensis Chr11 6 CH_camsi_886 3 9 0.0000317656
Erythranthe guttata scaffold_14 6 CH_egut_525 3 8 0.0000733944
Lonicera japonica GWHAAZE00000002 6 CH_lonja_1227 2 2 0.000898311
Sequoiadendron giganteum chr6 6 CH_sgi_1805 2 2 0.0000487151
Tarenaya hassleriana NW_010966177.1 6 CH_tha_165 3 4 0.0000083695

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001