Functional clusters

Information

  • Type InterPro
  • Description BRAHMA (BRM) ATPase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrC06 5 CH_bca_381 3 3 0.00000000685435
Brassica napus C03 5 CH_bna_1368 2 2 0.000519726
Brassica napus C07 5 CH_bna_385 3 3 0.0000000289412
Ceratophyllum demersum 1 5 CH_cde_434 2 2 0.000473878
Ceratophyllum demersum 4 5 CH_cde_435 2 2 0.000473878
Corchorus olitorius AWUE01014941.1 5 CH_col_167 2 2 0.000292099
Davidia involucrata GWHABJS00000016 5 CH_din_213 3 3 0.0000000150079
Helianthus annuus HanXRQChr16 5 CH_han_571 3 9 0.00000188101
Lupinus albus Lalb_Chr17 5 CH_lal_534 2 2 0.000157447
Magnolia biondii Chr17 5 CH_mbi_929 2 2 0.000145698
Oryza sativa ssp. japonica chr02 5 CH_osa_494 2 2 0.0000528123
Rhododendron simsii chr01 5 CH_rsi_810 2 2 0.000193592
Sequoiadendron giganteum chr9 5 CH_sgi_2301 2 2 0.000292291
Sequoiadendron giganteum chr9 5 CH_sgi_2302 2 2 0.000292291
Utricularia gibba unitig_8 5 CH_ugi_269 2 2 0.000246144
Vigna mungo CM024070.1 5 CH_vmu_460 2 2 0.000193842
Vanilla planifolia CM028163.1 5 CH_vpl_266 3 9 0.00000687533
Vanilla planifolia CM028161.1 5 CH_vpl_721 2 2 0.00073888
Brassica carinata ChrC06 6 CH_bca_381 3 3 0.00000000685435
Brassica napus C03 6 CH_bna_1368 2 2 0.000519726
Brassica napus C07 6 CH_bna_385 3 3 0.0000000289412
Ceratophyllum demersum 1 6 CH_cde_434 2 2 0.000473878
Ceratophyllum demersum 4 6 CH_cde_435 2 2 0.000473878
Corchorus olitorius AWUE01014941.1 6 CH_col_167 2 2 0.000292099
Davidia involucrata GWHABJS00000016 6 CH_din_213 3 3 0.0000000150079
Helianthus annuus HanXRQChr16 6 CH_han_571 3 9 0.00000188101
Lupinus albus Lalb_Chr17 6 CH_lal_534 2 2 0.000157447
Magnolia biondii Chr17 6 CH_mbi_929 2 2 0.000145698
Oryza sativa ssp. japonica chr02 6 CH_osa_494 2 2 0.0000528123
Rhododendron simsii chr01 6 CH_rsi_810 2 2 0.000193592
Sequoiadendron giganteum chr9 6 CH_sgi_2301 2 2 0.000292291
Sequoiadendron giganteum chr9 6 CH_sgi_2302 2 2 0.000292291
Utricularia gibba unitig_8 6 CH_ugi_269 2 2 0.000246144
Vigna mungo CM024070.1 6 CH_vmu_460 2 2 0.000193842
Vanilla planifolia CM028163.1 6 CH_vpl_266 3 9 0.00000687533
Vanilla planifolia CM028161.1 6 CH_vpl_721 2 2 0.00073888

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001