Functional clusters

Information

  • Type InterPro
  • Description 3-dehydroquinate synthase domain

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amaranthus hybridus AmaHy_arrow1_Scaffold_3 5 CH_amhyb_234 2 2 0.0000841751
Ceratophyllum demersum 1 5 CH_cde_484 2 3 0.000710769
Davidia involucrata GWHABJS00000012 5 CH_din_578 2 2 0.000150038
Rosa chinensis RcHm_v2.0_Chr2 5 CH_rch_986 2 2 0.0000398653
Rhododendron simsii chr07 5 CH_rsi_894 2 2 0.000387184
Sequoiadendron giganteum chr5 5 CH_sgi_440 4 4 0.000000000000346852
Utricularia gibba unitig_699 5 CH_ugi_187 2 2 0.0000820479
Amaranthus hybridus AmaHy_arrow1_Scaffold_3 6 CH_amhyb_234 2 2 0.0000841751
Ceratophyllum demersum 1 6 CH_cde_484 2 3 0.000710769
Davidia involucrata GWHABJS00000012 6 CH_din_578 2 2 0.000150038
Rosa chinensis RcHm_v2.0_Chr2 6 CH_rch_986 2 2 0.0000398653
Rhododendron simsii chr07 6 CH_rsi_894 2 2 0.000387184
Sequoiadendron giganteum chr5 6 CH_sgi_440 4 4 0.000000000000346852
Utricularia gibba unitig_699 6 CH_ugi_187 2 2 0.0000820479

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001