Functional clusters
Information
- Type InterPro
- Description Glycerophosphodiester phosphodiesterase domain
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Amborella trichopoda | AmTr_v1.0_scaffold00154 | 5 | CH_atr_221 | 3 | 3 | 0.000000189332 |
| Brassica oleracea | C6 | 5 | CH_bol_548 | 3 | 4 | 0.0000524674 |
| Brassica oleracea | C2 | 5 | CH_bol_833 | 3 | 10 | 0.000628593 |
| Carya illinoinensis | Chr11 | 5 | CH_cil_61 | 8 | 16 | 9.15888e-20 |
| Carica papaya | supercontig_12 | 5 | CH_cpa_145 | 3 | 4 | 0.00000013557 |
| Davidia involucrata | GWHABJS00000001 | 5 | CH_din_391 | 3 | 5 | 0.0000107261 |
| Durio zibethinus | NW_019168270.1 | 5 | CH_dzi_154 | 4 | 6 | 0.00000000815113 |
| Glycine max | Gm08 | 5 | CH_gma_456 | 3 | 4 | 0.00000393226 |
| Helianthus annuus | HanXRQChr17 | 5 | CH_han_266 | 4 | 4 | 0.000000000315084 |
| Lupinus albus | Lalb_Chr00c48 | 5 | CH_lal_120 | 4 | 4 | 0.00000000210131 |
| Lupinus albus | Lalb_Chr10 | 5 | CH_lal_283 | 4 | 14 | 0.00000209581 |
| Nelumbo nucifera | chr1 | 5 | CH_nnu_354 | 3 | 8 | 0.0000321316 |
| Papaver somniferum | NC_039359.1 | 5 | CH_pso_917 | 3 | 12 | 0.0000936983 |
| Phaseolus vulgaris | Chr06 | 5 | CH_pvu_179 | 4 | 6 | 0.0000000037469 |
| Vigna mungo | CM024073.1 | 5 | CH_vmu_228 | 3 | 4 | 0.00000210388 |
| Amborella trichopoda | AmTr_v1.0_scaffold00154 | 6 | CH_atr_221 | 3 | 3 | 0.000000189332 |
| Brassica oleracea | C6 | 6 | CH_bol_548 | 3 | 4 | 0.0000524674 |
| Brassica oleracea | C2 | 6 | CH_bol_833 | 3 | 10 | 0.000628593 |
| Carya illinoinensis | Chr11 | 6 | CH_cil_61 | 8 | 16 | 9.15888e-20 |
| Carica papaya | supercontig_12 | 6 | CH_cpa_145 | 3 | 4 | 0.00000013557 |
| Davidia involucrata | GWHABJS00000001 | 6 | CH_din_391 | 3 | 5 | 0.0000107261 |
| Durio zibethinus | NW_019168270.1 | 6 | CH_dzi_154 | 4 | 6 | 0.00000000815113 |
| Glycine max | Gm08 | 6 | CH_gma_456 | 3 | 4 | 0.00000393226 |
| Helianthus annuus | HanXRQChr17 | 6 | CH_han_266 | 4 | 4 | 0.000000000315084 |
| Lupinus albus | Lalb_Chr00c48 | 6 | CH_lal_120 | 4 | 4 | 0.00000000210131 |
| Lupinus albus | Lalb_Chr10 | 6 | CH_lal_283 | 4 | 14 | 0.00000209581 |
| Nelumbo nucifera | chr1 | 6 | CH_nnu_354 | 3 | 8 | 0.0000321316 |
| Papaver somniferum | NC_039359.1 | 6 | CH_pso_917 | 3 | 12 | 0.0000936983 |
| Phaseolus vulgaris | Chr06 | 6 | CH_pvu_179 | 4 | 6 | 0.0000000037469 |
| Vigna mungo | CM024073.1 | 6 | CH_vmu_228 | 3 | 4 | 0.00000210388 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |