Functional clusters

Information

  • Type InterPro
  • Description S-type anion channel

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_2 5 CH_aly_665 2 2 0.000660044
Brassica oleracea C4 5 CH_bol_451 3 6 0.0000116617
Camellia sinensis var. sinensis Chr5 5 CH_camsi_537 4 18 0.000000185539
Erigeron canadensis Conyza_canadensis_scaffold:6 5 CH_eca_807 2 2 0.000673083
Eucalyptus grandis Chr05 5 CH_egr_232 6 9 1.09026e-16
Eutrema salsugineum scaffold_8 5 CH_esa_502 2 2 0.000761499
Fragaria vesca Fvb7 5 CH_fve_624 2 2 0.00017673
Hydrangea macrophylla Hma1.2p1_0328F.1 5 CH_hma_170 3 3 0.000000647896
Hydrangea macrophylla Hma1.2p1_0142F.1 5 CH_hma_235 3 7 0.0000226562
Lonicera japonica GWHAAZE00000001 5 CH_lonja_1208 2 2 0.000898311
Magnolia biondii Chr10 5 CH_mbi_1129 2 2 0.000485661
Malus domestica Chr01 5 CH_mdo_1078 2 2 0.000227527
Medicago truncatula chr6 5 CH_mtr_1329 2 2 0.000616295
Nelumbo nucifera chr7 5 CH_nnu_548 2 2 0.000481684
Olea europaea chr11 5 CH_oeu_607 2 2 0.000533789
Prunus persica Pp02 5 CH_ppe_743 2 2 0.000447577
Rhododendron simsii chr03 5 CH_rsi_951 2 2 0.000645307
Sequoiadendron giganteum chr7 5 CH_sgi_247 6 6 2.85266e-18
Schrenkiella parvula ch2-1 5 CH_spa_355 2 2 0.00078734
Selenicereus undatus Scaffold_33679 5 CH_sun_374 2 2 0.000726639
Theobroma cacao Chromosome_8 5 CH_tca_743 2 2 0.000732386
Vaccinium macrocarpon chr7_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_775 2 2 0.000929238
Vigna mungo CM024072.1 5 CH_vmu_504 2 2 0.000387685
Vanilla planifolia CM028153.1 5 CH_vpl_158 3 3 0.000000286631
Vanilla planifolia CM028151.1 5 CH_vpl_77 4 6 0.000000000635245
Arabidopsis lyrata scaffold_2 6 CH_aly_665 2 2 0.000660044
Brassica oleracea C4 6 CH_bol_451 3 6 0.0000116617
Camellia sinensis var. sinensis Chr5 6 CH_camsi_537 4 18 0.000000185539
Erigeron canadensis Conyza_canadensis_scaffold:6 6 CH_eca_807 2 2 0.000673083
Eucalyptus grandis Chr05 6 CH_egr_232 6 9 1.09026e-16
Eutrema salsugineum scaffold_8 6 CH_esa_502 2 2 0.000761499
Fragaria vesca Fvb7 6 CH_fve_624 2 2 0.00017673
Hydrangea macrophylla Hma1.2p1_0328F.1 6 CH_hma_170 3 3 0.000000647896
Hydrangea macrophylla Hma1.2p1_0142F.1 6 CH_hma_235 3 7 0.0000226562
Lonicera japonica GWHAAZE00000001 6 CH_lonja_1208 2 2 0.000898311
Magnolia biondii Chr10 6 CH_mbi_1129 2 2 0.000485661
Malus domestica Chr01 6 CH_mdo_1078 2 2 0.000227527
Medicago truncatula chr6 6 CH_mtr_1329 2 2 0.000616295
Nelumbo nucifera chr7 6 CH_nnu_548 2 2 0.000481684
Olea europaea chr11 6 CH_oeu_607 2 2 0.000533789
Prunus persica Pp02 6 CH_ppe_743 2 2 0.000447577
Rhododendron simsii chr03 6 CH_rsi_951 2 2 0.000645307
Sequoiadendron giganteum chr7 6 CH_sgi_247 6 6 2.85266e-18
Schrenkiella parvula ch2-1 6 CH_spa_355 2 2 0.00078734
Selenicereus undatus Scaffold_33679 6 CH_sun_374 2 2 0.000726639
Theobroma cacao Chromosome_8 6 CH_tca_743 2 2 0.000732386
Vaccinium macrocarpon chr7_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_775 2 2 0.000929238
Vigna mungo CM024072.1 6 CH_vmu_504 2 2 0.000387685
Vanilla planifolia CM028153.1 6 CH_vpl_158 3 3 0.000000286631
Vanilla planifolia CM028151.1 6 CH_vpl_77 4 6 0.000000000635245

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001